Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g05821 ATGGCTGCCATCAACAGTACCAAAGGAGTCTATGAATTTGTCCGAGTTCGCCGTCTCCAATATGGAAATTGCTTCAAGACCAAGTTATTCGGGGAAACTCACGTTTTTATTTCGAGCAAGGAATCAGCAAAAGTGATTCTGCGAAATGAAGGAGGGAAATTCTCAAAGAAGTACATGAAGTCAATCTCGGAGATCTTGGGTCCCGATAGCTTGTTGTGTGCAGCTGAGCAGCATCACAAACTCATTCGTAGCCATCTCTTCAGTTTGTTCTCAGCTCATTCTTTGTCCTCCTTTGTTCAATTGTTTGATCAACTTGTAATTGAAACTACAAGTACCTGGACATGTGGATCCCTTTTGATCATACAAGATGAAGCGCTCAAGCTAGCTTGTAAGGCGATGTGCAAGATGCTAATAAGCATCGAGAGTGGCCATGAACTAGCGGCGATGCAAAAGAATGTTGCTCTTGTGTCTGAAGCAATGCTTGCGTTACCTTTGAGAATACCCTGGACCAGATTCAACAAAGGCCTTCAGGCTAGAAAAAGAATTATGGACATATTGGAGAAAGTTATCAATGAAAGAAGAAGCGGAATCGGTACTAGTCGTGTAGATTTTCTTCAACAACTCTTAACAGATGATAATAAACTAGAAAAGGATGAAGTAACAAGGTTAACAGATAAAGAGATCAAAGATAATATCTTAACTATGATAATTGCTGGACAAGACACAATAGCAATTGCAATGACATGGATGATCAAATTTGTGGATGAGAATCAGGAGGCTCTTAATGAGCTTAAGAAAGAACAAGTTCAGATTGAGGAAAAATGTAGAGGAAATGTTTATCTTACATTAGAAGCTCTTTCTGAGATGCAATATGCTTCCAAGGTGGTAAAAGAAGCGTTACGGATGGCATCTGTAGTACAATGGTTGCCTAGAGTAGCAGCACTTGAGGACTGTGAAATTGAAGGATTTAAGATCAAGAAAGGGTGGAACATCAATATTGATGCTAGATCAATACATCATGATCCAACTATTCATAGTGACCCAAATGTGTTCAATCCTTCAAGATTTCCTAGTGAGTCAAAACCAAACAGCTTCTTAGCTTTTGGGATTGGAGGAAGAATGTGTCTAGGGAAGAACATGGCTGAATCAATGATGTTGGTGTTTCTCCATCGTCTCGTCACTGGTTTCAAGTGGAAGGTGATTGATTCAGATTCAAGTATTCAGAAATCAGCACTTTTTACAAAACTTAAGAGCGGTTATCCGGTACGATTGATGTCTGTGAAGGAGGACGGCGCGAACAAAAAAACTATATGA 1314 0.3973 MAAINSTKGVYEFVRVRRLQYGNCFKTKLFGETHVFISSKESAKVILRNEGGKFSKKYMKSISEILGPDSLLCAAEQHHKLIRSHLFSLFSAHSLSSFVQLFDQLVIETTSTWTCGSLLIIQDEALKLACKAMCKMLISIESGHELAAMQKNVALVSEAMLALPLRIPWTRFNKGLQARKRIMDILEKVINERRSGIGTSRVDFLQQLLTDDNKLEKDEVTRLTDKEIKDNILTMIIAGQDTIAIAMTWMIKFVDENQEALNELKKEQVQIEEKCRGNVYLTLEALSEMQYASKVVKEALRMASVVQWLPRVAALEDCEIEGFKIKKGWNINIDARSIHHDPTIHSDPNVFNPSRFPSESKPNSFLAFGIGGRMCLGKNMAESMMLVFLHRLVTGFKWKVIDSDSSIQKSALFTKLKSGYPVRLMSVKEDGANKKTI 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g05821 437 Coils Coil 254 274 - -
Trre6g05821 437 CDD CYP90-like 17 424 - -
Trre6g05821 437 Gene3D Cytochrome P450 2 428 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g05821 437 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 368 377 IPR017972 GO:0005506|GO:0016705
Trre6g05821 437 SUPERFAMILY Cytochrome P450 8 424 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g05821 437 PRINTS P450 superfamily signature 238 255 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g05821 437 PRINTS P450 superfamily signature 375 386 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g05821 437 PRINTS P450 superfamily signature 294 305 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g05821 437 PRINTS P450 superfamily signature 366 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g05821 437 Pfam Cytochrome P450 7 408 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g05821 437 PANTHER CYTOCHROME P450 26 11 402 - -
Trre6g05821 437 PRINTS E-class P450 group I signature 18 37 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g05821 437 PRINTS E-class P450 group I signature 334 358 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g05821 437 PRINTS E-class P450 group I signature 375 398 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g05821 437 PRINTS E-class P450 group I signature 365 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g05821 437 PRINTS E-class P450 group I signature 227 244 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g05821 Trre-Chr6 58851625 58854224 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g05821 1 398 Cytochrome P450 AT1G19630 56.858 2.91e-169 481
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g05821 - - lang:109327951 645.966