Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g05820 ATGATTTCCCAATTGGTAAAGGAACATTCTTATATGTGTTACTTTGTTGGTCTTTTATTGGTGTTTTTATCATGTTTAAAGGTGTGGACACTTTGGTGCAAAAAGAACAAGTGCAGTAGTGTTGGCATTCCTCCGGGAAATAGAGGATTACCCTTCATAGGAGAGACACTGCATTTCATGGCTGCCATCAACAGTACCAAAGGAGTCTATGAATTTGTCCGAGTTCGCCGTCTCCAATATGGAAATTGCTTCAAGACCAAGTTATTCGGGGAAACTCACGTTTTTATTTCGAGCAAGGAATCAGCAAAAGTGATTCTGCGAAATGAAGGAGGGAAATTCTCAAAGAAGTACATGAAGTCAATCTCGGAGATCTTGGGTCCCGATAGCTTGTTGTGTGCAGCTGAGCAGCATCACAAACTCATTCGTAGCCATCTCTTCAGTTTGTTCTCAGCTCATTCTTTGTCCTCCTTTGTTCAATTGTTTGATCAACTTGTAATTGAAACTACAAGTACCTGGACATGTGGATCCCTTTTGATCATACAAGATGAAGCGCTCAAGCTAGCTTGTAAGGCGATGTGCAAGATGCTAATAAGCATCGAGAGTGGCCATGAACTAGCGGCGATGCAAAAGAATGTTGCTCTTGTGTCTGAAGCAATGCTTGCGTTACCTTTGAGAATACCCTGGACCAGATTCAACAAAGGCCTTCAGGCTAGAAAAAGAATTATGGACATATTGGAGAAAGTTATCAATGAAAGAAGAAGCGGAATCGGTACTAGTCGTGTAGATTTTCTTCAACAACTCTTAACAGATGATAATAAACTAGAAAAGGATGAAGTAACAAGGTTAACAGATAAAGAGATCAAAGATAATATCTTAACTATGATAATTGCTGGACAAGACACAATAGCAATTGCAATGACATGGATGATCAAATTTGTGGATGAGAATCAGGAGGCTCTTAATGAGCTTAAGAAAGAACAAGTTCAGATTGAGGAAAAATGTAGAGGAAATGTTTATCTTACATTAGAAGCTCTTTCTGAGATGCAATATGCTTCCAAGGTGGTAAAAGAAGCGTTACGGATGGCATCTGTAGTACAATGGTTGCCTAGAGTAGCAGCACTTGAGGACTGTGAAATTGAAGGATTTAAGATCAAGAAAGGGTGGAACATCAATATTGATGCTAGATCAATACATCATGATCCAACTATTCATAGTGACCCAAATGTGTTCAATCCTTCAAGATTTCCTAGTGAGTCAAAACCAAACAGCTTCTTAGCTTTTGGGATTGGAGGAAGAATGTGTCTAGGGAAGAACATGGCTGAATCAATGATGTTGGTGTTTCTCCATCGTCTCGTCACTGGTTTCAAGTGGAAGGTGATTGATTCAGATTCAAGTATTCAGAAATCAGCACTTTTTACAAAACTTAAGAGCGGTTATCCGGTACGATTGATGTCTGTGAAGGAGGACGGCGCGAACAAAAAAACTATATGA 1491 0.395 MISQLVKEHSYMCYFVGLLLVFLSCLKVWTLWCKKNKCSSVGIPPGNRGLPFIGETLHFMAAINSTKGVYEFVRVRRLQYGNCFKTKLFGETHVFISSKESAKVILRNEGGKFSKKYMKSISEILGPDSLLCAAEQHHKLIRSHLFSLFSAHSLSSFVQLFDQLVIETTSTWTCGSLLIIQDEALKLACKAMCKMLISIESGHELAAMQKNVALVSEAMLALPLRIPWTRFNKGLQARKRIMDILEKVINERRSGIGTSRVDFLQQLLTDDNKLEKDEVTRLTDKEIKDNILTMIIAGQDTIAIAMTWMIKFVDENQEALNELKKEQVQIEEKCRGNVYLTLEALSEMQYASKVVKEALRMASVVQWLPRVAALEDCEIEGFKIKKGWNINIDARSIHHDPTIHSDPNVFNPSRFPSESKPNSFLAFGIGGRMCLGKNMAESMMLVFLHRLVTGFKWKVIDSDSSIQKSALFTKLKSGYPVRLMSVKEDGANKKTI 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g05820 496 Gene3D Cytochrome P450 33 487 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g05820 496 PANTHER CYTOCHROME P450 26 41 461 - -
Trre6g05820 496 Pfam Cytochrome P450 44 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g05820 496 PRINTS P450 superfamily signature 434 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g05820 496 PRINTS P450 superfamily signature 297 314 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g05820 496 PRINTS P450 superfamily signature 425 434 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g05820 496 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g05820 496 SUPERFAMILY Cytochrome P450 40 483 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g05820 496 Coils Coil 313 333 - -
Trre6g05820 496 CDD CYP90-like 76 483 - -
Trre6g05820 496 PRINTS E-class P450 group I signature 286 303 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g05820 496 PRINTS E-class P450 group I signature 77 96 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g05820 496 PRINTS E-class P450 group I signature 424 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g05820 496 PRINTS E-class P450 group I signature 393 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g05820 496 PRINTS E-class P450 group I signature 434 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g05820 496 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 427 436 IPR017972 GO:0005506|GO:0016705
Trre6g05820 496 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g05820 Trre-Chr6 58851625 58854401 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g05820 11 457 Cytochrome P450 AT1G19630 54.667 0.0 514
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g05820 - - lang:109327951 716.072