Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g05801 ATGCAATATGAGTACGAGAATTATGATCCCTCGTTTCCCGACCAACCTGTGGTTGACCAGTACCTCCCAGTTTGGGCCAGGTTACCGGCCTTCAAGTCCAAACCAGCCTTTATATGGGCTGAAGATTACCTAAACACCATTTCCACTACCCACCTCACCTATGAACAACTCAATACATCAGTAGATATAATTTCAACTCAACTACTTTTTCCACTTCAAAGAGGTGACACTGTCCTTATTCTTTGCTCTCCAGGACTTGACCTTGTTAAGGTCATTTTTGGTTGTCAAAGAGCTGGTCTTTTAACTGTCCCTATAGTCCCTCCTCACCCTTCTTTCACCAATGAAAAAAATTACCATCACCTTATAAGGATCATTTCACAAACTAAACCAAAAGCTGCAATAGCTCACCCCAATTACATTTCAACTATTCAACAATACATCACTTCCTCCCACAACAAGAACAAACTAGCTCAAATGTTACAAACTCTCTTATGGATTTCCACAGAAGATATAAAAAACAATAACATAAATTCAAACTCAAATTTATATTCATACAATGGTCGAAAACCGGACGAGGTTTATTTGGTTCAATACACATCAGGTGCAACCGGAATACCAAAACCGGTTCTTGTAACAACAGGTTCGGCAGCACATAACGTTAGAACAGCAAGAAAAGCTTATGATCTTCATCCAAACAGTACTATAGTTTCATGGTTACCTCAATACCATGATTGTGGTCTCATGTTTTTGTTACTCACAATTGTATCTGGTGCAACATGTGTTCTTACTTCGCCAACATCGTTCATCAAACGACCAAGACTCTGGCTTGAGTTAATGTCGAAATTCAATGCTACTTGCACCCCCGTTCCTTCTTTCACACTACCACTTGTAGTTAAACGTGGAGGAATTCACAAAGGAAATTTTCCCATTAATCTATCATATCTTAACAACCTTATAATCATCAATGAACCTATTTATAGAGATTCGGTGGTTGAATTTGTTCACACTTTTTCGCCATTCGGCTTAAAAAGTTCCTCTATATCACCTTCTTATGGATTAGCAGAAAATTGTACTTTTGTTTCAACTGCATGGAGATATAAAGAAGAAAATTTTCCAACTCACAATAAACTTTTACCAGTTGCAAGACTTGAGGAACAAGAAGACATGGACATCATGGTTGTTAATGAAGAAACACTTGAACCTGTTGAAGATGGTGTTGAAGGAGAAATTTGGGTTTCATCACCAAGTAATGCTTCTGGTTACCTTGGTCACCCTTCTTTAACAAGAGAAGTTTTTCATGCAAGAATCAGAAACAAAGTTCGTAGGTGTTTTCTTCGAACCGGTGACAAAGGAATAGTAAAAGGAGAAAAAAGGTATCTCTTTGTTACTGGTAGAATTCAAGACACTATAAAGCTTCAAAATGGTGAAAAGATCCATCCACATTACATAGAAACCGCGGTTTTCAACAGTTTTCCGAAGTTACTACGAGGTGGTTGTGTTGCGGCTTTTAAAGTTTTAGCAACAGTTGTAATTGTTGCAGAGATGCAGAGGATTGAAAAAGATGTGGATGAGGAGATTCTAAGGAGTATTTGTGAGGGAATTAAAGAAAGTGTTATGAAAAAAGAGGGTGTTGAAGTTGGATGGATTGTTTTGGTTAAGAGTGAATGTGTTCCAAAAACTACTTCTGGGAAATTGCAAAGATGGGCTGCTAAAGAGAAGCTTCTTGATGGAAAAATGAACATTTTGATGGAGATGAGGTTAGGAAAAGATATTATGAGGATAAAACATGAGGTAGTAAGAAAAGTGGGTGTTGAAAAAAATGATCACTTAGGTGCAGAAACTCGTAGCTCATTGATCTCACATCTATGA 1869 0.3767 MQYEYENYDPSFPDQPVVDQYLPVWARLPAFKSKPAFIWAEDYLNTISTTHLTYEQLNTSVDIISTQLLFPLQRGDTVLILCSPGLDLVKVIFGCQRAGLLTVPIVPPHPSFTNEKNYHHLIRIISQTKPKAAIAHPNYISTIQQYITSSHNKNKLAQMLQTLLWISTEDIKNNNINSNSNLYSYNGRKPDEVYLVQYTSGATGIPKPVLVTTGSAAHNVRTARKAYDLHPNSTIVSWLPQYHDCGLMFLLLTIVSGATCVLTSPTSFIKRPRLWLELMSKFNATCTPVPSFTLPLVVKRGGIHKGNFPINLSYLNNLIIINEPIYRDSVVEFVHTFSPFGLKSSSISPSYGLAENCTFVSTAWRYKEENFPTHNKLLPVARLEEQEDMDIMVVNEETLEPVEDGVEGEIWVSSPSNASGYLGHPSLTREVFHARIRNKVRRCFLRTGDKGIVKGEKRYLFVTGRIQDTIKLQNGEKIHPHYIETAVFNSFPKLLRGGCVAAFKVLATVVIVAEMQRIEKDVDEEILRSICEGIKESVMKKEGVEVGWIVLVKSECVPKTTSGKLQRWAAKEKLLDGKMNILMEMRLGKDIMRIKHEVVRKVGVEKNDHLGAETRSSLISHL 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g05801 622 Pfam AMP-binding enzyme 32 473 IPR000873 -
Trre6g05801 622 Gene3D - 5 466 IPR042099 -
Trre6g05801 622 PANTHER DISCO-INTERACTING PROTEIN 2 DIP2 -RELATED 8 585 - -
Trre6g05801 622 SUPERFAMILY Acetyl-CoA synthetase-like 19 577 - -
Trre6g05801 622 Gene3D - 468 596 IPR045851 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g05801 Trre-Chr6 58740688 58742556 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g05801 189 574 Monolignol Biosynthesis Gene Families AT4G19010 26.768 6.13e-13 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g05801 - - gmx:102666455 917.916