Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g05795 ATGGCAAACCATCCCTTTGAAGCAGCTCTTGCATTGGAGTCTTTGAGGGCTCCTCTCAACCCACATCCAATGTCTGCTCATGATAAATATATTCATGAGATTAGGGTTAGATTTCGATCCTATTATGTGGAGTTCAACGTGCTTGATGGTGCTGTGAGACTCCCACGTATGTTTGCTGATGATTTTGGCGATGAAATTGGTCGACTTGCTACTTTGATTGATCTTGGAGGAAATCAGTTTGAAGTTTTGGTTGATAAGGTCAATGATAGTATCTATTTGACCAAAGGGTGGGCTGCTCTGCGTGATTTTTACAACATTCGTGTTGGTTGCTGGATGCAGCTCGTGTATACAGGAATGAATCACTTTGGAGTTTTGGTGATGGATAGGCTTCATAACCGGATTGATCCACCAAGATTTGTGCCACCTATGAGATTAGTGATTGATAAAATTGATGTACCACCTTACTTTGTTGATAATCTACCCGACTCACCTGATCTTTTGGCATATTCACATGATCCATCTTATTTTCATATACTCCATGATAAAGTGCTAAGCCATTTTGATGTTTCTTCTGGATTTTTAGTGTTGCCCTACGAAGGGTTTGGGGAGCATGTCTTCCACCAAACAACCAACTCGGTCAAATTGGTCGATGACTCTGGAAATGCATGGTTTTGTACTTTGACTCCCGTTGCAACGCCCGTTAGATGTTTTAAACTTGGTGGTCAGTGGGGTAACATAGTTGCAGCAAGAAGGCTCTCAGTTGGAGACAATATAAGACTTGGAGTACAAGGAGCTGGTGCTGGAGAGATTGTTTACTTGGAACGAGATCCTTGA 834 0.4209 MANHPFEAALALESLRAPLNPHPMSAHDKYIHEIRVRFRSYYVEFNVLDGAVRLPRMFADDFGDEIGRLATLIDLGGNQFEVLVDKVNDSIYLTKGWAALRDFYNIRVGCWMQLVYTGMNHFGVLVMDRLHNRIDPPRFVPPMRLVIDKIDVPPYFVDNLPDSPDLLAYSHDPSYFHILHDKVLSHFDVSSGFLVLPYEGFGEHVFHQTTNSVKLVDDSGNAWFCTLTPVATPVRCFKLGGQWGNIVAARRLSVGDNIRLGVQGAGAGEIVYLERDP 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g05795 277 PANTHER B3 DOMAIN-CONTAINING 42 257 - -
Trre6g05795 277 SUPERFAMILY DNA-binding pseudobarrel domain 181 263 IPR015300 -
Trre6g05795 277 SUPERFAMILY DNA-binding pseudobarrel domain 42 128 IPR015300 -
Trre6g05795 277 CDD B3_DNA 182 256 IPR003340 GO:0003677
Trre6g05795 277 Gene3D - 33 130 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g05795 Trre-Chr6 58707187 58708297 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g05795 46 135 B3 DNA Binding Superfamily AT3G18990 26.667 3.88e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g05795 - - tpra:123886139 317.775