Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g05786 ATGTCTAAACGCTTCAAGATGAAATTTACAATCCCTTCTTTTCAAATGTGTCGCTCTGATGACCTCTCCTCTTTTCCGGGAAATCCTGTTCCGGCAATATATCGTCTTTCTCCGGTGAACTCCAAAGCACATGACATAGGCTACCCTAATATTCAAGATTCGTCGCCGTCATCATCACCAGAACAACAATGCAAGGTGTCTTCAAAGATCAAGAAAGTGAAATCCAAAGGCCGAAAAGGTACCTCAGATGTTCCATCGAGAAAGAGCGAGTTTCTGATGGATAAAATCAATGAAGAAGAGAGTGAAAGTTTGATTTCTTGCTTGTCAAGATTCTCCGAAGACCATAAGGTACATTCTTCGAGTTCTTCCAGTACTATGGACAGTGAAGTTAGACCCAATCCAAATTCTGATAATAAAAAAGAGAATACATATTTAATAAGCACAGATAGAAGACCGATATGTAGTGTTAAAAAGGTTGAGAGAGTGAGGTTTCAAAGTACTATAGGGAATCAAAGAGGAGTAGAAAGGAAGGTTATGTCAAGTAGAATGGAAGAGAAGGTAAAAGAAAGCTTTGCTTTGGTGAAAAAGTCAAAGGATCCTTATGAAGACTTCAAGAAGTCAATGTTAGAGATGATAGAAGAGATGGAGATGTATGAGGCTAAGGACTTGGAACAACTATTGCAGTGTTTTTTGGCCTTGAATTCTAGGGATTATCATGGAGTAATTGTGAGAGCTTTCATGGAGATTTGGCAACAAATGTTTGTTTGGAATCCTAAGTCAATTAAAAATTTTCAAACTAATGTTCAAACTACGGACGTAGAAAAGTAG 828 0.378 MSKRFKMKFTIPSFQMCRSDDLSSFPGNPVPAIYRLSPVNSKAHDIGYPNIQDSSPSSSPEQQCKVSSKIKKVKSKGRKGTSDVPSRKSEFLMDKINEEESESLISCLSRFSEDHKVHSSSSSSTMDSEVRPNPNSDNKKENTYLISTDRRPICSVKKVERVRFQSTIGNQRGVERKVMSSRMEEKVKESFALVKKSKDPYEDFKKSMLEMIEEMEMYEAKDLEQLLQCFLALNSRDYHGVIVRAFMEIWQQMFVWNPKSIKNFQTNVQTTDVEK 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g05786 275 MobiDBLite consensus disorder prediction 77 92 - -
Trre6g05786 275 MobiDBLite consensus disorder prediction 47 66 - -
Trre6g05786 275 Pfam Transcriptional repressor, ovate 197 254 IPR006458 -
Trre6g05786 275 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 76 254 IPR038933 GO:0045892
Trre6g05786 275 ProSiteProfiles OVATE domain profile. 193 252 IPR006458 -
Trre6g05786 275 MobiDBLite consensus disorder prediction 44 92 - -
Trre6g05786 275 MobiDBLite consensus disorder prediction 116 144 - -
Trre6g05786 275 NCBIfam uncharacterized plant-specific domain TIGR01568 192 253 IPR006458 -
Trre6g05786 275 Coils Coil 201 221 - -
Trre6g05786 275 MobiDBLite consensus disorder prediction 118 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g05786 Trre-Chr6 58641750 58642577 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Trre6g05786 Ovate 1.9e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g05786 - - gmx:102662518 257.299