Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g05779 ATGGCTTCTGACGGAGCAACTTCGGCGGCCAACAGTCGGAGGAAACCGTCGTGGAGGGAGAGAGAGAATAACAGGAGGAGAGAGAGACGGAGAAGAGCCATAGCTGCGAAGATTTACGCAGGATTAAGGTCTCAGGGGAATTACAATTTACTTAAACACTGTGATAACAATGAAGTGTTGAAAGCTCTTTGTGCTGAAGCTGGTTGGACTGTTGAAGAAGATGGCACCACTTATCGCAGGGGATCGAGGGCAGCAACACCAGGCGATGGTGCAGGAAACAGAAACAATCCATTTTCATCGCAAAATCCAAGTCCTCTTTCATCATCATTTCCAAGTCCAATCCCATCCTACCAAGTTAGCCCTTCTTCCTCTTCATTTCCGAGCCCGTCTCGTATGGATGCAAACAACAATGCATCAAATCTCTTTCCATACGGTCGTGCTGTGTTCCCCAACATGTGTCTCCCACCTTTAAGAATATCAAACAGTGCACCTGTGACGCCTCCCATCTCGTCACCAACCTCAAGAAATCCTAAACCCATGATTCCCACATGGGAATCTATTGCCAAAGCATCCGCTGCATCGTTCAACCACCCTCTCTTTGCAGCTTCTGCGCCCACTAGCCCATCGCACCGTCACCTTTATGCACCGCCTACTATACCTGAATGTGACGAGTCTGATACTTCTACTGTTGAGTCTGGCCAGTGGCTGAACTTTCAAGCCTTTGCAAATGCTGCTAAATCAGTCTCTCCAACATTGAACTTTATGAAACCTGTAATCAATGAGCAGCATAACATGGTGCCTGATAGCAGAATGCAAGAGATGAGGATTTCAGAGCCAGAGTTTGGAGTGCAGGTGGTGAAGCCTTGGGTTGGGGAAAGGATTCATGAAGTGGGTTTGGATGATTTGGAGCTTACTCTTGGACATGGAAAGGCTCCCAGTTAA 942 0.4766 MASDGATSAANSRRKPSWRERENNRRRERRRRAIAAKIYAGLRSQGNYNLLKHCDNNEVLKALCAEAGWTVEEDGTTYRRGSRAATPGDGAGNRNNPFSSQNPSPLSSSFPSPIPSYQVSPSSSSFPSPSRMDANNNASNLFPYGRAVFPNMCLPPLRISNSAPVTPPISSPTSRNPKPMIPTWESIAKASAASFNHPLFAASAPTSPSHRHLYAPPTIPECDESDTSTVESGQWLNFQAFANAAKSVSPTLNFMKPVINEQHNMVPDSRMQEMRISEPEFGVQVVKPWVGERIHEVGLDDLELTLGHGKAPS 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g05779 313 MobiDBLite consensus disorder prediction 92 132 - -
Trre6g05779 313 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 7 310 IPR033264 GO:0003700|GO:0006351|GO:0009742
Trre6g05779 313 MobiDBLite consensus disorder prediction 77 132 - -
Trre6g05779 313 Pfam BES1/BZR1 plant transcription factor, N-terminal 12 139 IPR008540 -
Trre6g05779 313 MobiDBLite consensus disorder prediction 1 30 - -
Trre6g05779 313 MobiDBLite consensus disorder prediction 14 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g05779 Trre-Chr6 58576853 58578664 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g05779 13 311 BZR Transcription Factor Family AT1G75080 64.151 1.97e-106 312
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Trre6g05779 BES1_N 1.8e-55 No_clan