Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g05767 ATGCAACCAAGTCCAATTCTTTCGTTAGGCCTTCCAAAATACATTGAAGAACCACTTTTTCACACTTTTCGTCTTCCACCAATTCTGGTGAAAAAAGATTATCAGAGACTCTACGATTTTTTCTACGAGTCATCTACTGGACCGGTTTTAGATGAAGCAGTTAGACTCGGAGTTTCTAAAGAAGAAGCAGTTCATAATTTGTTATTCACAACATGTTTTAATTCATTTGGTGGAATGAAGCTTTTTTTCCCGAATTTGTTGAAGTGGATTGGAAGAGGTGGTGTTAATCTACACCGTAGATTAGCGGAAGAGATTCGGTCTGTTGTTAAATCGAACAGTGGGAAAGTGTCTATGGCTGCGATGGAACAAATGCCGTTGATGAAATCAGTGGTTTATGAAGCACTTAGAATTGAACCACCAGTGCCATTACAATATGGTAAAGCAAAACAAGATTTTGTTATTGAGAATCATGAGAATTCGTTTCAAGTGAAAGAAGGTGAAATGTTGTTCGGGTTTCAACCTTTTGCGACGAAAGATCCTAAGATATTTGATAAAGCTGGTGAGTTTGTTGGAGAGAGGTTTATGGGTGAGGGAGAGAAGTTGTTGAAACATGTGTTCTGGTCGAATGGCCGTGAAACGGAAGAACCAACGGTTGGTAATAAGCAATGTCCTGGTAAGGATTTTGTTGTGTTGTTTTCAAGGCTTTTGGTGGTGGAGTTATTTCTTCGTTATGATACTTTTGGTATTCAAGTTGGGAAGTCTCCAACAGGATCTGCTGTTACTTTTACCTCTCTTAAGAGAGCAACTTTTTAG 813 0.3875 MQPSPILSLGLPKYIEEPLFHTFRLPPILVKKDYQRLYDFFYESSTGPVLDEAVRLGVSKEEAVHNLLFTTCFNSFGGMKLFFPNLLKWIGRGGVNLHRRLAEEIRSVVKSNSGKVSMAAMEQMPLMKSVVYEALRIEPPVPLQYGKAKQDFVIENHENSFQVKEGEMLFGFQPFATKDPKIFDKAGEFVGERFMGEGEKLLKHVFWSNGRETEEPTVGNKQCPGKDFVVLFSRLLVVELFLRYDTFGIQVGKSPTGSAVTFTSLKRATF 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g05767 270 PRINTS E-class P450 group IV signature 177 195 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g05767 270 PRINTS E-class P450 group IV signature 223 241 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g05767 270 PRINTS E-class P450 group IV signature 124 140 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g05767 270 Gene3D Cytochrome P450 1 270 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g05767 270 PANTHER CYTOCHROME P450 26 32 245 - -
Trre6g05767 270 CDD CYP74 5 263 - -
Trre6g05767 270 Pfam Cytochrome P450 98 205 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g05767 270 SUPERFAMILY Cytochrome P450 14 246 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g05767 Trre-Chr6 58479185 58479997 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g05767 5 270 Cytochrome P450 AT5G42650 67.416 1.30e-132 383
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g05767 K01723 - gmx:100807192 428.328