Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g05764 ATGATCACAAAACACTCACTATTAATCCTTTTATTAGCACTAATCTTTTTTCCTGTAATAATCAAATGTCAAGTTAATTACCGTGAGTGCCATCAATCATGTGGTTCATCAAAACCCTTCCCTTACCCATTCGGATTCTCTGCCGGTTGCGAAATTCGACTAAACTGCACCGTCCACGGCGAAATCTTCATCGGAGAATTTCCAGTTCAATTGGTAAACTCAAACAGTATAATAGTTAAAATCAAATCGCAATGTAATCGTCGATTTGAAACCTTTCATCAACTCTTCAGTCATAAATACGCACCTACTTCGGGAAACGTAATTCTGTTACAAAATTGTACGGAAAATCGATCGCCTTGTATGATACCGGAGACTCTGCTTCCTAGTCAATTCAAATCTGAATCTGACGGTTGCAACAACAACGCCTCTGGCGGTGGCGGCGGAGGGAAATTGAGTTGTTACATTGAAAATAATACGAGAGGGTTCGTGAATGAGACAAAATTGGAGAGGAACGGGTGTAAGTACTTTATATCGTCGATTTCATCGGAAAGATTGAGAAACAGTTCGGATTCGGCGGTTTCTTTGGAAGTAGCTACGATTGTGCTTGGATGGTGGCTTCATGGAGATAAGTGTCTTTGTTCTGATCATGCTAATTGTACTCAAATTAGGTCGCCGATTGATGGAAAGGCTGGATTTCAATGTCGATGTAATGAAGGATTTGCCGGCGATGGGTTTTTGGCTGGAAATGGCTGCCGGAAACGGAAAGCCTCATCAACATGCAACCCAGCAAAGTACATGTCCGGAAGATGTGGAGGAAATGCAAGATTCATTGTCTTAATTGGAGGATTTGTTTTTGGTGTATCACTGATGGTTGCTCTGGGTTCAGTATGCTGTTACTTTCGCCGACGCACCAAATTGAGAGTCACAAAGAGCACAAAAAGACGCTTCACTGAAACTACTAACAATTACAGTGTTCCTATCTATCACTACAAAGACATAGAAAAAGCTACAAATAATTTTTCAGAGAAACAAAGATTGGGAACAGGAGCATATGGTACAGTTTATTCTGGAAAACTTTACAACGATGAATATGTCGCCATCAAAAGAATAAAACACAGAGACAATGAAAGCATTGAACAAGTCATGAATGAGATCAAACTTATTTCCTCTGTTAGTCACCCCAATTTGGTGCACTTGTTGGGTTGTTCAATTGAATATGGAGAACAGATATTAGTGTATGAGTTCATGCCCAATGGAACACTAAATCAGCATTTACAAAGAGAGAAAGGGAACGGACTTTCATGGCCTGTTAGACTCAAAATTGCAACAGAAACAGCACAAGCCATAGCTCATCTTCATTCAGCAATTAATCCACCTATTTACCATAGAGATATCAAATCAAGTAACATACTTTTGGACGAAAATTTTGGATCCAAAGTAGCAGATTTTGGGCTTTCTAGACTAGGAATAACTGAAATATCTCATGTGTCTCATGTTTCAACTGCCCCACAAGGAACACCTGGCTATGTTGACCCACAATACCATCAAGACTTTCACCTTTCTGATAAAAGCGATGTATATAGCTTTGGTGTTGTTCTCGTTGAGATCATAACTGGACTAAAAGTAGTTGATTTTTCTCGTCCTCATAATGAAGTGAATTTGGCTTCTCTTGCTGTTGACAGGATCAGAAAAGGGCTTTTAGAAGATATTATAGACCCAATTGTGTTTCTTGAGCCCGAAGCAACCAGTGATGGGTGGACACTTTCTTCCATACACAAGGTAGCTGAGTTGGCATTCAGATGTCTTGCATTTCACAGGGATATGAGACCTTGTATGACAGAAGTGGCAACTGAGTTAGAGCAGCTAAGTTTGAATAAGTGGAACTCTTTTGGAGAAAACAGCTCTATTATAGATCACTTGTCTTCTTGTTCTTCTTCTTCTTCTAGTGAAAGTGAGAAACCATTGAGCAGCAACACCACATTGAAGGATGTTGGGCCTAAGGGTAACCATCTTAAGCTGGAGACTGTGCCTGTTTCTTTTAAGTCAGTTGATAGGCTCAATAGTAGTTCACCCGTTTCGGTGCAAGATCCAGACCCATGGTTTAGTGAGCAAAGTTCTCCTTCATCGAATAGTTTTCCCAGTAAGTCATTTGATCATGGATCTGTTTCATATGGTCAACAAGCTAGTTTGTAG 2193 0.4004 MITKHSLLILLLALIFFPVIIKCQVNYRECHQSCGSSKPFPYPFGFSAGCEIRLNCTVHGEIFIGEFPVQLVNSNSIIVKIKSQCNRRFETFHQLFSHKYAPTSGNVILLQNCTENRSPCMIPETLLPSQFKSESDGCNNNASGGGGGGKLSCYIENNTRGFVNETKLERNGCKYFISSISSERLRNSSDSAVSLEVATIVLGWWLHGDKCLCSDHANCTQIRSPIDGKAGFQCRCNEGFAGDGFLAGNGCRKRKASSTCNPAKYMSGRCGGNARFIVLIGGFVFGVSLMVALGSVCCYFRRRTKLRVTKSTKRRFTETTNNYSVPIYHYKDIEKATNNFSEKQRLGTGAYGTVYSGKLYNDEYVAIKRIKHRDNESIEQVMNEIKLISSVSHPNLVHLLGCSIEYGEQILVYEFMPNGTLNQHLQREKGNGLSWPVRLKIATETAQAIAHLHSAINPPIYHRDIKSSNILLDENFGSKVADFGLSRLGITEISHVSHVSTAPQGTPGYVDPQYHQDFHLSDKSDVYSFGVVLVEIITGLKVVDFSRPHNEVNLASLAVDRIRKGLLEDIIDPIVFLEPEATSDGWTLSSIHKVAELAFRCLAFHRDMRPCMTEVATELEQLSLNKWNSFGENSSIIDHLSSCSSSSSSESEKPLSSNTTLKDVGPKGNHLKLETVPVSFKSVDRLNSSSPVSVQDPDPWFSEQSSPSSNSFPSKSFDHGSVSYGQQASL 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g05764 730 ProSitePatterns Protein kinases ATP-binding region signature. 346 368 IPR017441 GO:0005524
Trre6g05764 730 Gene3D Transferase(Phosphotransferase) domain 1 416 641 - -
Trre6g05764 730 MobiDBLite consensus disorder prediction 641 668 - -
Trre6g05764 730 FunFam Wall-associated receptor kinase-like 14 307 415 - -
Trre6g05764 730 SMART serkin_6 340 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre6g05764 730 MobiDBLite consensus disorder prediction 685 730 - -
Trre6g05764 730 Gene3D Laminin 212 246 - -
Trre6g05764 730 Pfam Protein kinase domain 340 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre6g05764 730 SUPERFAMILY Protein kinase-like (PK-like) 315 620 IPR011009 -
Trre6g05764 730 ProSitePatterns Serine/Threonine protein kinases active-site signature. 460 472 IPR008271 GO:0004672|GO:0006468
Trre6g05764 730 ProSiteProfiles Protein kinase domain profile. 340 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre6g05764 730 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 6 663 IPR044652 GO:0004672
Trre6g05764 730 FunFam Wall-associated receptor kinase-like 20 416 632 - -
Trre6g05764 730 MobiDBLite consensus disorder prediction 641 664 - -
Trre6g05764 730 Gene3D Phosphorylase Kinase; domain 1 300 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g05764 Trre-Chr6 58448662 58453616 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g05764 4 712 Receptor kinase-like Gene Family AT2G23450 49.791 0.0 641
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Trre6g05764 Pkinase 2.6e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g05764 - - tpra:123893607 1290.02