Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g05727 ATGCCGAATCCAGAAACTCACCGTCAACACAACAATCGCCAACCTCACCGTTCCAAAACTCGACCCTCATCTTCATCGGTTCGAACCAAACCTCGATCCAAATCCAGAGTTCCTCTTACGAAACTACTCCGAGTAGCGTCAGTTGCCGGTGGGATTCAATTTGGATGGGCTTTACAACTCTCTCTTCTAACTCCCTATGTTCAACAGCTCGGAATTCCGCATGCTTGGGCTAGCATTATTTGGCTCTGTGGGCCTCTTTATGGGCTTCTTGTTCAGCCGTTGGTTGGTCATTTGAGTGATCGCTGTACCAGTCGATTCGGTCGTCGGAGACCGTTTATTTTTGGTGGAGCTGTGTCCATAGTTATATCTGTTCTTATTATTGGTCATGCTGCTGATTTGGGATGGAAATTTGGTGATACTAAAGAACATCGCCGTTCTGCTGTAGCGTTTTTTGTTTTCGGGTTTTGGATTTTGGATGTTGCTAATAATGTTACTCAAGGTCCTTGTAGAGCTTTGCTTGGTGATCTCACTGGTAAGGATCATCGAAGGACACGTGTCGCAAATGCTTATTTCTCCTTATTTATGGCTATTGGTAACATTCTTGGGTATGCGACTGGATCATACAGCGGTTGGTACAAGGTCTTTCCTTTCACACTCACCCCTGCATGCAATATTAGCTGTGCGAATCTCAAGTCTGCTTTCTTTCTGGACATTATTTTCATTATCATCACCACCTATATCAGTATCATGGCAGCTAATGAGGTGCCTCTAGGGTCAAGTGCGGCAGCCAATGCTGAAGCAGCAGAGTCAGGTGGTAGTGCAGAAGAAGCTTTCCTGTGGGAGCTGTTTGGGACATTTAGATATTTTTCAAAGCCTATATGGGTAATATTGTCTGTTACTGCTCTAACATGGATTGGGTGGTTTCCATTTCTTCTATTCGATACCGATTGGATGGGCCGAGAAATTTATGGTGGTGAGCCAAATGGAGGCGCTTATTATGATACCGGAGTTAGAATGGGGGCGCTTGGTTTATTGCTTAATTCAGTCGTTCTTGGAATAACATCATTACTCATGGAGAGGCTATGCAGGAAGCGGGGGCCTGGGTTTGTGTGGGGAGTTGCAAACATCCTAATGGCCATCTGCTTTGTAGCAATGCTTATAGTAACCTATGTGGCAAATACCATTGGTTATTTAGGCAAAGATCTACCGCCCACTAGAATCGTGATATATGCACTGGCAATCTTTACCATTCTCGGGTTTCCACTGGCAATCACTTACAGTGTTCCATATGCCTTAATTTCGACGCATATTCAGTCATTGGGGCTTGGCCAAGGATTGTCAATGGGAGTCCTAAATCTTGCAATCGTGTTCCCACAGATGATAGTGTCCTTAGGAAGTGGACCATGGGATCAGTTATTTGGTGGAGGAAACTCTCCAGCCTTTGCTGTGGCAGCTGTTGCAGCCCTTGTTAGTGGACTCATAGCTGTCTTGGCTATTCCCCGAACCGGTGCTCAAAAGCCTAGAAGCCCAGTATGA 1536 0.4544 MPNPETHRQHNNRQPHRSKTRPSSSSVRTKPRSKSRVPLTKLLRVASVAGGIQFGWALQLSLLTPYVQQLGIPHAWASIIWLCGPLYGLLVQPLVGHLSDRCTSRFGRRRPFIFGGAVSIVISVLIIGHAADLGWKFGDTKEHRRSAVAFFVFGFWILDVANNVTQGPCRALLGDLTGKDHRRTRVANAYFSLFMAIGNILGYATGSYSGWYKVFPFTLTPACNISCANLKSAFFLDIIFIIITTYISIMAANEVPLGSSAAANAEAAESGGSAEEAFLWELFGTFRYFSKPIWVILSVTALTWIGWFPFLLFDTDWMGREIYGGEPNGGAYYDTGVRMGALGLLLNSVVLGITSLLMERLCRKRGPGFVWGVANILMAICFVAMLIVTYVANTIGYLGKDLPPTRIVIYALAIFTILGFPLAITYSVPYALISTHIQSLGLGQGLSMGVLNLAIVFPQMIVSLGSGPWDQLFGGGNSPAFAVAAVAALVSGLIAVLAIPRTGAQKPRSPV 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g05727 511 MobiDBLite consensus disorder prediction 1 36 - -
Trre6g05727 511 FunFam Sucrose transport protein 36 499 - -
Trre6g05727 511 SUPERFAMILY MFS general substrate transporter 42 504 IPR036259 -
Trre6g05727 511 Pfam MFS/sugar transport protein 57 204 - -
Trre6g05727 511 Gene3D MFS general substrate transporter like domains 40 499 IPR036259 -
Trre6g05727 511 CDD MFS_SLC45_SUC 42 478 - -
Trre6g05727 511 PANTHER SUGAR TRANSPORTER 36 497 - -
Trre6g05727 511 MobiDBLite consensus disorder prediction 18 33 - -
Trre6g05727 511 NCBIfam sucrose/proton symporter 37 502 IPR005989 GO:0005886|GO:0008515|GO:0015770
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g05727 Trre-Chr6 58169567 58175669 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g05727 7 507 Sucrose Transporter Gene Family AT1G09960 69.721 0.0 683
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g05727 K15378 - gmx:100787939 801.201