Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g05718 ATGGATGCCACCCACAAGATGTTTTGTAACACAGAACCTGTTAACCCTTTAAACTCAATGGGCATGCAAGTGTCTTGTATTCTTGTCGTGTCACACTTCTTCAATGTTGTCCTTAGAACTGTTGGTCAACCTGGACCCATTGCACAAATTCTGGCTGGTTTGGTATTAGGACCAATGTCACATATTCCGTACATAAAAGAAACATTTTTCCCCGCGAATTCGATGAATTACTATGAAGTAGTGAGCTTCTTCTGTCGTATAAATTTCATGTTTTTATTTGGTTTAGAAATGAATATTCACTACACATTGCGAAATGTGCGTATGGTGGGTTTGGTAGCATGTGGGGGTACGTTAATGGGTGCAATATTCGGTCTATCAGTCTCTTTTTATTTGTATGAAGAATTAGATATAAATGCGCCAATGCCATCTTTTTGTATGGTTATAATGTTAGTGGTAGCATACACAAGTTCTCCGATGGTGATTCGTTTGACAGGAGATTTAAGGTTTGCCGCATCCGATGTTGGTCGAATCGCGGTGTCGGCCGCGTTGATTACAGAAATGGGTTGCTTATTGTTTTTTAATGTGATGGTTAATTGGACTAGACCATACCATAATTCAACTGGTATGGGATGTCTCATTATTACAACTCTTGTGATTTTTACTAATAGATATTTAGCAATTTGGTTAAATGCAAGACATAGAAATCAAAAGTACCTAAGAGCTCCTGAGTTATTACTCATTCTTTTTTTGCTTCTAACTACCTCAATGGTTATAGAAATTTGGGGTTACAATAGTATTATTCATTGTTTTTTTGTGGGATTGTTATTTCCTAAAGAAGGGAAAACAGCTAGAACATTGCTTCATAAACTTGGTTATTCAATTTATAATTTTGTACTTCCTGTATATTTTGGGTACATGGGTTTACAATGTGATCTTGTAAATGTATTTAAGAGTTTGGATAAGGTAACAAATACAGTCATATTGATTTTGTTGAGCATTGGAAGCAAACTTGGTGGAACTCTTTTAGTTTGTCGTTACCTTCATATTCCTACAAGTGAAGGAATTTTTCTTGGATTTATATTGAACACTAGAGGTTATGCTGACCTTCTATTTGTCGCAGCTGCAGCAAAACAAAATCTTGACACAGAAGCTTACAATGTGTTGCTAGTAGCGATAGTCATAAACACGATAATATCGGGAATTATTGTGGCTTTTCTCGCCAGGGGGGAAGAGAAAATGTTTTCGAATATTCATACTGCAATTGAACCACAAGAGATAGATGACGAGCTTAGAATTTTGGCTTGTGTATATGATCCTCGACAGGTATCAGCGATACTTGCAACAGTACTAGCAATACATGGATCTAAAGCATCACCTTCTACCACTTATTTAATGCACCTAATAGAGCTTGTGAAGAAGATCAAATCCAATTTATTGTTCCATGAAAAAGACAATGCTGACCTTAGTGATGATGATGACTATGGTGGAAATGATGTGGTTGAAATTAATAATTCCTTAGACGCGTTCACTGCAGACACAAAGATTTTGGTTCATCAAAGACGTGCAGTATCGTCTTTTCCAAGTTTGTATGAAGATGTTTGCAACGAAGCTGAAGATCTTCAAGTATCAATTATCCTTCTTCCTTTTCACAAGCATCAACGAATTGATGGAAAACTCGAAAGCGGCAAAGAAGGTATAAGGATTACCAATCAAAAGGTTCTTAGGCACGCCCCTTGTTCTATCGGTGTGATTATAGAAAGAGGACTTGCTAAGGTCCCCGGTTTCTCACAATTGATTGCATCCGAAAATACGCAAAATGTTGCAACACTTTTCTTTGGAGGCCCGGATGATCGCGAGGCTATAGCTTGGAGCCTACGTATTTCTAAATGTTCCCGCATTAACCTAACAATCATTCGATTTTTGTTGTCTTCTTCTTCATCGCATACCGAACATATTGAAAGTGGAATAAACTCGGACGAAAAAGAAATTTTAATGTCATTATCCGGTGAAGAGACCGTGAACGAGATCGACAATACATTTATGGTTGATTTCTATAACAGATATGTGACTTCAGGACAAATTGGATATGTGGAAAAGTTTGTGGAGGATGGAACACAAACAGTTGAATCTTTGAAAGAGATTGGAGACATGTACTCTTTGTTTATAGTAGGAAGAGGTGGTAGAGGGAATAGTTCATTAACAATAGGTATGAGTGATTGGGAAGAGTGTCCAGAACTTGGAACAGTTGGTGATGTATTGGCTTCTTCAGATTTTGATATTCATGGTTCTGTTTTGGTCATTCAACAACATAGAGATGCCAAGAAAGGCATAATTCATGATTAA 2343 0.3713 MDATHKMFCNTEPVNPLNSMGMQVSCILVVSHFFNVVLRTVGQPGPIAQILAGLVLGPMSHIPYIKETFFPANSMNYYEVVSFFCRINFMFLFGLEMNIHYTLRNVRMVGLVACGGTLMGAIFGLSVSFYLYEELDINAPMPSFCMVIMLVVAYTSSPMVIRLTGDLRFAASDVGRIAVSAALITEMGCLLFFNVMVNWTRPYHNSTGMGCLIITTLVIFTNRYLAIWLNARHRNQKYLRAPELLLILFLLLTTSMVIEIWGYNSIIHCFFVGLLFPKEGKTARTLLHKLGYSIYNFVLPVYFGYMGLQCDLVNVFKSLDKVTNTVILILLSIGSKLGGTLLVCRYLHIPTSEGIFLGFILNTRGYADLLFVAAAAKQNLDTEAYNVLLVAIVINTIISGIIVAFLARGEEKMFSNIHTAIEPQEIDDELRILACVYDPRQVSAILATVLAIHGSKASPSTTYLMHLIELVKKIKSNLLFHEKDNADLSDDDDYGGNDVVEINNSLDAFTADTKILVHQRRAVSSFPSLYEDVCNEAEDLQVSIILLPFHKHQRIDGKLESGKEGIRITNQKVLRHAPCSIGVIIERGLAKVPGFSQLIASENTQNVATLFFGGPDDREAIAWSLRISKCSRINLTIIRFLLSSSSSHTEHIESGINSDEKEILMSLSGEETVNEIDNTFMVDFYNRYVTSGQIGYVEKFVEDGTQTVESLKEIGDMYSLFIVGRGGRGNSSLTIGMSDWEECPELGTVGDVLASSDFDIHGSVLVIQQHRDAKKGIIHD 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g05718 780 Gene3D - 19 414 IPR038770 -
Trre6g05718 780 PANTHER CATION/H + ANTIPORTER 15 771 - -
Trre6g05718 780 Pfam Sodium/hydrogen exchanger family 27 407 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g05718 Trre-Chr6 58094633 58097409 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g05718 12 780 Antiporter Super Family AT1G79400 39.203 0.0 585
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g05718 K26731 - gmx:100804522 1276.15