Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g05632 ATGATCTCATCCTTGATGTTACCATCTGCTGCTACAGCATTAAGAAGACCATGTTGTAGTTGTAGCATCACTCCATCATCATCTTCATCTTCACGAAGACTTGCTCTCTTTCATCTTCTCACTACCGGTAGTATTGCTATACCACAACAATCCCAATTATTTGGTGGAAAAGGATCACAATTCTTCAGAATACCAGAGGCTAATGCTGCTGAAAAGCTTGACCAAAACTTGTTTGATTGGGTCCAAAATGACAACAGAAGATTTCTACATGTTGTTTACAGTGTTGGAGATTTGGACAAGACTATAAAATTCTACACTGAATGCCTTGGCATGAAGCTGTTGAGAAAACGCGATATACCAGAAGACAAATATTCAAATGCATTTCTTGGATATGGGCCTGAAGAGTCCTATTTTACAGTTGAACTCACTTATAATTATGGAGTGGATAAATATAACATTGGAACTGGTTTTGGTCATTTTGGTATTGTAGCTGAAGATGTTGCGAAGACAGTAGATATTGTAAAAGCAAAAGGGGGAAAGGTTACCAGGGAACCAGGTATTGTCAAAGGTGGCTCTGCAGTAACTGCTTCCGTTGAAGATCCTAGTGGTTATAGGTTTGAGCTTTTGGAGAGAAGATCTACACGCGAACCCTTATCCCAAGTGAATCTTCAAGTAGGCGATCTTGATGGTGTCGTAGCCTTCTATCAGAAAGCTGCAGGCATGAAACTTCTCCGTAAGATAGACAACCCTGAGGAAAAGTACTCAGTAGCAGTGTTGGGTTATGGTCCTGAAGCTAATGGTCCTGTTCTAGAACTGAGATATAACTACGGCGTCACTAATTATGATAAAGGAAATGGTTATACACAGATTGCAATAGGCACGAATGATGTCTATAAGACTGCAGAAGCAATCAAATTAAGCGGAGGGAAGATTATCCGTGAACCTGGACCCTTACCAGGTATCAACACCAAGATCGTTGTTTGTTTGGACCCCGATGGTTGGAAATTGGTATTTGTTGATAATGTTGATTTTCTCAAGGAATTAGAGTGA 1050 0.4019 MISSLMLPSAATALRRPCCSCSITPSSSSSSRRLALFHLLTTGSIAIPQQSQLFGGKGSQFFRIPEANAAEKLDQNLFDWVQNDNRRFLHVVYSVGDLDKTIKFYTECLGMKLLRKRDIPEDKYSNAFLGYGPEESYFTVELTYNYGVDKYNIGTGFGHFGIVAEDVAKTVDIVKAKGGKVTREPGIVKGGSAVTASVEDPSGYRFELLERRSTREPLSQVNLQVGDLDGVVAFYQKAAGMKLLRKIDNPEEKYSVAVLGYGPEANGPVLELRYNYGVTNYDKGNGYTQIAIGTNDVYKTAEAIKLSGGKIIREPGPLPGINTKIVVCLDPDGWKLVFVDNVDFLKELE 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g05632 349 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 217 341 IPR037523 -
Trre6g05632 349 Gene3D - 214 349 IPR029068 -
Trre6g05632 349 Gene3D - 60 213 IPR029068 -
Trre6g05632 349 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 86 212 IPR029068 -
Trre6g05632 349 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 218 341 IPR029068 -
Trre6g05632 349 PANTHER LACTOYLGLUTATHIONE LYASE 72 349 - -
Trre6g05632 349 CDD GlxI_Ni 89 209 - -
Trre6g05632 349 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 87 211 IPR037523 -
Trre6g05632 349 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 220 337 IPR004360 -
Trre6g05632 349 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 88 208 IPR004360 -
Trre6g05632 349 NCBIfam lactoylglutathione lyase 88 213 IPR004361 GO:0004462|GO:0046872
Trre6g05632 349 ProSitePatterns Glyoxalase I signature 1. 90 111 IPR018146 GO:0004462|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g05632 Trre-Chr6 57417038 57419146 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g05632 218 340 Calmodulin-binding Proteins AT1G08110 25.000 4.56e-08 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g05632 K01759 - gmx:100810908 529.635