Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g05621 ATGAAAAGCCATCAACCAAAACAACAACTTAAAACTCAATTATTCTCATGTGGCTTCTTTCGACAATGTGGCCAAACAGTCCTTAGTCCAACTGCCACAGCTCCCACTCCACCACCACTCACTCTCACTCACACCTCAGCAACAACATGTGAATCTTCCACCTCTTCTAATTCTTCTAATTCCGCTACCACTTCTCAAAGTTTCACTCAGTGGCGTTTCTCTATTCCCACCCCCACTTCAACTCCAAACACCCCTCCTCCACCATCACCACCACCACCACCTCCTCTACCTTTTCTTTCCACTATTACAAATCTCCAAGAACTCTTCCACGTGTCAGACCTACAATTAACCACAGACCTTAACGCTGCACTTCATCTTCTAGAACGTTCTCTCGTTCCTAATCCACCGCAAGATCAACCACCGTGTCCTCCTAATCTCATGCGCGCACTCATCCGTAATTTACGCGAATCCAAATCTGCTACCAAGATTCTCTTCGCGCTTTGTCTCTCAGAAGCTAACCGTCGTGTCGCGGTTGAAGCCGGCGCCGTTGGCGCCGTCGTGGAATCTGCTCCGGAGCTAGACGGTCCTCCTGCTGAGAGAGCTCTAGCTGCGTTAGAGCTTATGTGTACTGTGCCGGAAGGTGCGGAGGAGGTTAGAGCTCACGCGCTGGCGGTTCCGGTGATGGTTACTGTGATGGGGAAAACGGGAGCGCGTGGGAAGGAGTATGCTATTGGTGTGCTTGCTGTGATTTATGGCGGTGATGCGGCGGATCAACAGACGGCTCCGCCGGAAGAGGTGGCGCGTGCGGTGGAGTTGGCTCTTCAAGGAGAGTGTAGTGCTAGGGGAAAAAGAAAAGGGGCCCAGCTTTTGAAGACGCTGCAAAATCTGTCTAACCCCCACTCTCATGAGACAAGTTGA 918 0.5131 MKSHQPKQQLKTQLFSCGFFRQCGQTVLSPTATAPTPPPLTLTHTSATTCESSTSSNSSNSATTSQSFTQWRFSIPTPTSTPNTPPPPSPPPPPPLPFLSTITNLQELFHVSDLQLTTDLNAALHLLERSLVPNPPQDQPPCPPNLMRALIRNLRESKSATKILFALCLSEANRRVAVEAGAVGAVVESAPELDGPPAERALAALELMCTVPEGAEEVRAHALAVPVMVTVMGKTGARGKEYAIGVLAVIYGGDAADQQTAPPEEVARAVELALQGECSARGKRKGAQLLKTLQNLSNPHSHETS 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g05621 305 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 1 302 - -
Trre6g05621 305 MobiDBLite consensus disorder prediction 28 99 - -
Trre6g05621 305 SUPERFAMILY ARM repeat 120 291 IPR016024 -
Trre6g05621 305 Gene3D - 102 304 IPR011989 -
Trre6g05621 305 MobiDBLite consensus disorder prediction 38 78 - -
Trre6g05621 305 MobiDBLite consensus disorder prediction 79 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g05621 Trre-Chr6 57342272 57343189 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g05621 145 295 U-box Gene Family AT1G49780 34.868 1.37e-19 86.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g05621 - - gmx:100814020 330.102