Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g05555 ATGGAATTCCCAAACAAAGATACAATACTAGAAATCGCTTCTGAGAGTTCGAAGTCACTTCAAAACCTTATCAGTGTTCTTACTCACCAACCCTCTCATTCTAACTCTAATGTCACAAATACCACCGTTGCCAACTTCAATAAACTCTCCTCCTCCTTGCCCAGCCGCACTGGCCATGCCCGTTTTCGTCGCGCTCCAGTGGTTCCATTACCTCAACCGCTACAAACTTCATTTCCCTCTATGCCACAACCACCACTTCATATTCAACCTCAACACCAATCTTTAACTCTAGATTTCACTAAACCTAACATCTTGTGA 318 0.434 MEFPNKDTILEIASESSKSLQNLISVLTHQPSHSNSNVTNTTVANFNKLSSSLPSRTGHARFRRAPVVPLPQPLQTSFPSMPQPPLHIQPQHQSLTLDFTKPNIL 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g05555 105 MobiDBLite consensus disorder prediction 87 105 - -
Trre6g05555 105 MobiDBLite consensus disorder prediction 64 105 - -
Trre6g05555 105 MobiDBLite consensus disorder prediction 72 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g05555 Trre-Chr6 56841263 56841580 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g05555 5 105 WRKY Transcription Factor Family AT2G24570 38.462 3.18e-14 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g05555 - - tpra:123894177 93.9745