Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g05463 ATGGGGGCACCGTTTCAAGGAATAGTTCAAGATGTCAAAGGAAGAGCTAAATGCTATAAACAAGATTGGGTTGGCGGAATCTATTCCGGCTTTAGCATATTGGCTCCAACTTTCTACATATTCTTTGCTTCTGCTCTTCCTGTTATTGCTTTTGGAGAGCAACTTAGTAGGGATACAGATGGAAGCTTGAGTACAGTAGAAACATTAGCATCTACCGCCATTTGTGGAATTATACACTCAATTATAGGTGGCCAACCTTTGTTGATTTTAGGAGTTGCAGAACCAACTGTTATAATGTACACTTATCTCTACAGTTTCTGCAAAAATACACCTGAATTGGGTTCCAAGCTCTTTCTAGCTTGGGCTGGTTGGGTTTGTGTTTGGACATCAGTCATGTTAATTATGCTTGCAATTTTTAATGCTTGCACAGTTATTTCTAGATTTACAAGAGTTGCAGAAGAGTTGTTTGGCATGCTAATCACTGTTCTTTTCTTTCAAGAGGCTATAAAGGGACTGATAGGCGAGTTCAGCACTTCCAAGGTTGAAAATTCTTCCTCGGAGGAACTTCAAGCCCAATGGCGGTATACAAATGGATTACTTGCAGTCATTTTCGCCTTTGGACTAATTGTCAGTGCACTTAAAAGCAGAAGAGCAAGATCATGGCAATATGGAACAAGGAAGCTACGGGGCTTTATTGCTGATTATGGTGTTCCATTGATGGTAGTGTTGTGGACTGCAGTATCTTATATAATGCCAGCCTACGTTCCAGATAGTGTTCCCAGAAGGCTGTTTTGTCCACTTCCCTGGGAACCTGCTTCTCTTTATCACTGGACAGTAATGAAGGATATGGCGAAGGTACCCGTGGTTTATATATTTGTGGCAATTATTCCAGCTTTGATGATAGCAGGTTTATACTTTTTCGATCATAGTGTGGCTTCTAAGATGGCACAACAGAAAGAATTCAACCTTCAAAAGCCATCTGCATACCATTATGATATTTTGCTACTTGGAATAATGACTCTGATTTGTGGTCTCCTTGGCCTTCCTCCTTCAAATGGAGTCCTTCCACAGTCCCCCATGCATACAAAGAGTTTGGCGGTTCTTAGGAAGCAGCAAATCCGAAAGAGGGTTGTGAAAAGCGCCAGGGAATGCATTCAAGAACAGGGTTCCAGCTCTGAATTATATGGAAAAATGCAAGCTGTGTTCGTTGAAATGAATACAGCCCCTACTGATAAAGAATTAGAGAATTTGAGAGAAGTTGTAATGAGATCTAATACCAAGGCTCGTGCAATGGAACATTTTGATCCTGAGAAATACGTAGAAGGTTCTTTACCAGTTCGGGTTAATGAACAAAGAATGTCCAACTTATTGCAGTCCCTCCTCGTTGGTGTATCAATAATAGGCATCTCCCTTATCAAAAAGATTCCAACTTCACTTTTATGGGGATATTTTGCGTACATGGCAATTGATAGTCTTCCAGGGAACCAGTTCTGGGAAAGGATATTGCTCCTCTTCATCGCCCCAAGCCGCCGTTACAAAATATTGCAAGGTTCACATGCCTCATTCGTGGAGTCAGTACCATTCAAGACCATCGCTGGATTTACAGCCTTACAGCTGGCATATTTTCTGTTCTGTTTTGGGGTCACATGGATACCTGTTGGTGGAATACTGTTTCCGCTACCATTCTTCCTTCTCATAGTTCTAAGAGAACACTTGCTACCAAAGCTATTCGATCCTGACCATCTTCAGGAACTAGATGCTTCTGAGTACGAGGAAATTGTCGGCGGTCCACGTCTGGGTAACGGGCCAGTTGATGGTGATACCGATGGAAGCTCAAATGATTACTATGATGCAGAGTTATTGGATGAGATGACAACCAGCAGAGGAGAGTTGAAACTTAGAACTGTAAGCACCAATGATCGAAACCGAAGTACCAGCTTCAGTGATCGAAACCGAAGTACCAGTACCAGCTTCAGTGATCAAAACCACAGTATCAGCTTCAATGAAAACAGACACATTTAA 2022 0.4189 MGAPFQGIVQDVKGRAKCYKQDWVGGIYSGFSILAPTFYIFFASALPVIAFGEQLSRDTDGSLSTVETLASTAICGIIHSIIGGQPLLILGVAEPTVIMYTYLYSFCKNTPELGSKLFLAWAGWVCVWTSVMLIMLAIFNACTVISRFTRVAEELFGMLITVLFFQEAIKGLIGEFSTSKVENSSSEELQAQWRYTNGLLAVIFAFGLIVSALKSRRARSWQYGTRKLRGFIADYGVPLMVVLWTAVSYIMPAYVPDSVPRRLFCPLPWEPASLYHWTVMKDMAKVPVVYIFVAIIPALMIAGLYFFDHSVASKMAQQKEFNLQKPSAYHYDILLLGIMTLICGLLGLPPSNGVLPQSPMHTKSLAVLRKQQIRKRVVKSARECIQEQGSSSELYGKMQAVFVEMNTAPTDKELENLREVVMRSNTKARAMEHFDPEKYVEGSLPVRVNEQRMSNLLQSLLVGVSIIGISLIKKIPTSLLWGYFAYMAIDSLPGNQFWERILLLFIAPSRRYKILQGSHASFVESVPFKTIAGFTALQLAYFLFCFGVTWIPVGGILFPLPFFLLIVLREHLLPKLFDPDHLQELDASEYEEIVGGPRLGNGPVDGDTDGSSNDYYDAELLDEMTTSRGELKLRTVSTNDRNRSTSFSDRNRSTSTSFSDQNHSISFNENRHI 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g05463 673 PANTHER ANION EXCHANGE PROTEIN 2 594 IPR003020 GO:0005452|GO:0006820|GO:0016020
Trre6g05463 673 FunFam probable boron transporter 2 15 57 - -
Trre6g05463 673 MobiDBLite consensus disorder prediction 639 673 - -
Trre6g05463 673 Gene3D Helical hairpin bin 15 57 - -
Trre6g05463 673 MobiDBLite consensus disorder prediction 639 666 - -
Trre6g05463 673 Pfam HCO3- transporter family 4 186 IPR011531 GO:0006820|GO:0016020
Trre6g05463 673 Pfam HCO3- transporter family 190 372 IPR011531 GO:0006820|GO:0016020
Trre6g05463 673 Pfam HCO3- transporter family 446 536 IPR011531 GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g05463 Trre-Chr6 56142839 56146141 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g05463 3 640 Antiporters AT5G25430 65.644 0.0 910
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g05463 K24194 - gmx:100787412 1041.18