Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g05408 ATGTGTTCAAGTGTGAGTCACCGTATTGTGCAGTGCTCAATCGCATCAGGAAGTGAAACCAATTATCCCGCCAAATTACAACCGTCATCTTTCTCAACGGTTAAGTTTCGATCTGACAGGCCCAACGACCATGCTTCTTCAGAGGTTTCAAGTAGCAGTAGGAGAGGGTTAATATGCAGCATAGCCACGTTGCCATGTCTTCTTCCCCTCACTCACATATTCGGTTCTCTCCCAGCCCACGCCATGCCACCAGATACAAAAGAATATCTTGTAATTAAACAAGAATTGAGGAAGGTATTATCAAAGAGAAAGGCAGCGGGTGTGCTTCGTTTGGTTTTCCATGATGCTGGAACTTTTGAAATTGATGACAATACAGGTGGCATGAATGGTTCTATTGTCTATGAACTTGAAAGACCTGAAAATGCTGGTCTGGAAAAATCAGTAAAGGTTCTGCAGAAAGCAAAAACTCAGATAGATGCTATCCGTCCAGTATCCTGGGCGGATCTTATTTCTGTGGCTGGAGCTGAAGCAGTTGAATTATGTGGAGGTCCTACCATCCAAGTTTTGCTCGGCAGACAAGATTCGCGGGTGCCTGATCCTGAAGGAAAACTTCCTGAGGAAACTCTTGATGCTTCTGGTTTGAAGAGAAACTTCCAGAAAAAAGGTTTTTCAACACAAGAACTGGTAGCTTTGTCTGGAGCCCACACTCTTGGAAGTAAAGGTTTTGGAAGCCCTACTACTTTTGACAATTCATATTATAAGGTTCTTCTGGAGAAGCCATGGACACCTTCCGGTAGTATGTCGACTATGATTGGTCTTCCTTCAGATCACGCACTTGTCGAGGATGATGAATGCTTAAGATGGATTAAAAAATATGCAGAAAGTGAGAGTATATTCTTTGAAGATTTCAAAAATGCGTATGTCAAGCTGGTGAATTCTGGTGCGAGGTGGAATAGCTTATAA 963 0.4278 MCSSVSHRIVQCSIASGSETNYPAKLQPSSFSTVKFRSDRPNDHASSEVSSSSRRGLICSIATLPCLLPLTHIFGSLPAHAMPPDTKEYLVIKQELRKVLSKRKAAGVLRLVFHDAGTFEIDDNTGGMNGSIVYELERPENAGLEKSVKVLQKAKTQIDAIRPVSWADLISVAGAEAVELCGGPTIQVLLGRQDSRVPDPEGKLPEETLDASGLKRNFQKKGFSTQELVALSGAHTLGSKGFGSPTTFDNSYYKVLLEKPWTPSGSMSTMIGLPSDHALVEDDECLRWIKKYAESESIFFEDFKNAYVKLVNSGARWNSL 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g05408 320 FunFam Adenylate/guanylate cyclase 205 307 - -
Trre6g05408 320 PRINTS Plant ascorbate peroxidase signature 182 194 IPR002207 GO:0004601|GO:0006979|GO:0020037
Trre6g05408 320 PRINTS Plant ascorbate peroxidase signature 291 315 IPR002207 GO:0004601|GO:0006979|GO:0020037
Trre6g05408 320 PRINTS Plant ascorbate peroxidase signature 221 242 IPR002207 GO:0004601|GO:0006979|GO:0020037
Trre6g05408 320 PRINTS Plant ascorbate peroxidase signature 105 120 IPR002207 GO:0004601|GO:0006979|GO:0020037
Trre6g05408 320 PRINTS Plant ascorbate peroxidase signature 123 133 IPR002207 GO:0004601|GO:0006979|GO:0020037
Trre6g05408 320 PRINTS Plant ascorbate peroxidase signature 203 220 IPR002207 GO:0004601|GO:0006979|GO:0020037
Trre6g05408 320 PRINTS Plant ascorbate peroxidase signature 163 181 IPR002207 GO:0004601|GO:0006979|GO:0020037
Trre6g05408 320 Gene3D Peroxidase, domain 2 205 307 - -
Trre6g05408 320 Pfam Peroxidase 93 295 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre6g05408 320 ProSiteProfiles Plant heme peroxidase family profile. 105 320 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre6g05408 320 FunFam L-ascorbate peroxidase 95 212 - -
Trre6g05408 320 PRINTS Haem peroxidase superfamily signature 227 242 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre6g05408 320 PRINTS Haem peroxidase superfamily signature 182 194 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre6g05408 320 PRINTS Haem peroxidase superfamily signature 105 119 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre6g05408 320 PRINTS Haem peroxidase superfamily signature 164 181 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre6g05408 320 Gene3D - 93 314 - -
Trre6g05408 320 ProSitePatterns Peroxidases proximal heme-ligand signature. 227 237 IPR019793 -
Trre6g05408 320 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 84 318 IPR044831 GO:0004601|GO:0034599
Trre6g05408 320 SUPERFAMILY Heme-dependent peroxidases 102 318 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trre6g05408 320 ProSitePatterns Peroxidases active site signature. 105 116 IPR019794 GO:0004601
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g05408 Trre-Chr6 55795408 55799300 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g05408 103 310 Peroxidase AT4G16270 31.955 4.03e-25 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g05408 K00434 - gmx:100792735 473.011