Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g05324 ATGGCTGGTTACTCAAAAACTGCTTCTACTTCTCTATTGTTTCTGTTCCTTCTCTTTGGCTTCTCTGCAGCTAAGGAACTTTTGGTTGGAGGTAAGATAGATGCATGGAAGGTTCCATCTTCTGAAGCTGATTCACTCAATCGATGGGCTGAAAAGTCTCGATTCAATGTCGGCGATCATCTTGTGTGGAAATATGATGGTGGAAAAGACTCAGTTTTGCAAGTAAACAAAGAAGATTATGCTAATTGCAACATCTCCAACCCTATTGAAGAGTACAAAGATGGGAACACTAAGGTGAAGCTAGACCGTTCTGGACCATTCTACTTCATCAGTGGAGCAAAGGGTCACTGTGAGAAGGGACAAAAACTCACTGTGGTTGTTATTTCACCAAGGCAAAGATACCGCGGAGTTTCTCCTGCACCTTCTCCAGCAGTGTTGGAATACAGTGGAGTTTCTCCTGCACTTTCTCCAGCAGAATTGGAACAAGGTCCAGCTGTTGCTCCTACTAGCAGTGCTCCAGTGTTGCAAACTGGTCTTGTGATGGTTATGGGACTATTAACTATTTATGTGGGTTTTTTCATTTGA 585 0.4308 MAGYSKTASTSLLFLFLLFGFSAAKELLVGGKIDAWKVPSSEADSLNRWAEKSRFNVGDHLVWKYDGGKDSVLQVNKEDYANCNISNPIEEYKDGNTKVKLDRSGPFYFISGAKGHCEKGQKLTVVVISPRQRYRGVSPAPSPAVLEYSGVSPALSPAELEQGPAVAPTSSAPVLQTGLVMVMGLLTIYVGFFI 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g05324 194 Pfam Plastocyanin-like domain 36 121 IPR003245 GO:0009055
Trre6g05324 194 Gene3D - 23 131 IPR008972 -
Trre6g05324 194 ProSiteProfiles Phytocyanin domain profile. 25 129 IPR003245 GO:0009055
Trre6g05324 194 CDD OsENODL1_like 25 128 IPR041846 -
Trre6g05324 194 FunFam Early nodulin-like protein 1 24 132 - -
Trre6g05324 194 SUPERFAMILY Cupredoxins 24 128 IPR008972 -
Trre6g05324 194 PANTHER BLUE COPPER PROTEIN 26 149 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g05324 Trre-Chr6 55013137 55013815 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g05324 10 193 Phytocyanin Superfamily AT2G25060 50.811 9.75e-60 183
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g05324 - - tpra:123897354 359.762