Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g05273 ATGATGCACATGACCTTCTATTGGAGCAAAAAAGTGACTCTCCTTTTCGATTCCTGGAAAACCGATTCATGGACGAGTTATACACTGAGTCTACTCGCTTGTCTCATCGTTTCCATTTTCTACCAGTTTCTCGAAAATCGCCGGATTCGTCTCAAGCTGTTAGCATCCGGTAAGCCATTTCCGGAGGAGATCCAGGCTCCTCTTATAGGGCGGACGATCCTCGGAAGTAGAGCTAAATCAGGTGTTAGAGTCGCCGGAGCTGTTCTGTTCGGGTTGAGCTCTGCGATCGGGTATTTCTTGATGTTATCTGTTATGTCTTATAACGGTGGTGTGTTTATTGCTATTGTTGTTGGTCTTGCTGTTGGTTATTTGGGTTTCAGGAGTGATGGTGAAGATTCTGCTGTTGTTGATAGTTCTTGTGCATGTGCTTGA 432 0.4514 MMHMTFYWSKKVTLLFDSWKTDSWTSYTLSLLACLIVSIFYQFLENRRIRLKLLASGKPFPEEIQAPLIGRTILGSRAKSGVRVAGAVLFGLSSAIGYFLMLSVMSYNGGVFIAIVVGLAVGYLGFRSDGEDSAVVDSSCACA 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g05273 143 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 1 133 IPR007274 GO:0005375|GO:0016020|GO:0035434
Trre6g05273 143 Pfam Ctr copper transporter family 4 126 IPR007274 GO:0005375|GO:0016020|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g05273 Trre-Chr6 54638191 54638622 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g05273 1 143 Inorganic Solute Cotransporters AT5G20650 54.967 7.23e-52 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g05273 K14686 - gmx:100805457 229.18