Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g05209 ATGGTGTTCATTGATTTGGAATGGTTGTTTCCAATTCCAATTAGTTTCTCTTTTGATTCAACAATATTGTTTACACTATTGGCTTTAGTAGGAGGATGGTTGATTTATCTATATGAGCCATATTGGAAGGTAAGGAAGGTTCCAGGCCCACCATCTCTGCCTTTGGTAGGACATCTTCACTTAATGGCTAAACATGGCCCTGATGTTTTCTCAATCCTTGCCAAGCAATATGGCCCAATCTACAGATTTCATATGGGAAGACAGCCATTAATAATTGTAGCAGATGCAGAACTATGTAAAGAGGCTGGAATAAAAAAATTTAAAGACATTCCAAATAGAAGCACTCCCTCTCCCATTAAAGCTTCTCCACTTCACCAAAAGGGCCTCTTCTTCACCAGGGATTCACAATGGTCTACCATGAGGAACACAATTTTGTCTGTATATCAACCATCACACCTATCAAGTTTAGTGCCAACAATGCAATCATTCATAGAATCCGCCACTCAGAATCTTGACTCACAAAAAGAAGATATTGTGTTTTCTAATTTATCGCTTAAACTCGCGACGGATGTGATTGGACAAGCAGCATTTGGTGTTAATTTTGGCCTCTCTGAACCTCATTCTGTTCGCAGCGAAATCGAGAGTGTTAATGTTAATAAGGACGACGTAATGAGTGCAAGTGATAGTAATGAAGTAACGGATTTCATCAACCAACATATATACTCTACAACTCAACTTAAGATGGATTTGTCCGGTTCATTCTCGATCATACTTGGTCTACTTGTTCCAATTCTTCAGGAACCATTTAGACAGATTTTGAAGCGAATACCGGGCACCATGGACTGGAAAATCGAGCGTACTAACAAAAAACTAGGTGGTCGTCTTGATGAGATTGTAGAGAAGAGAATGAACGATAGAACACGTAGTTCAAAGGATTTCTTGTCACTTATACTAAATGCTAGAGAATCAAAAGCAGTTTCAGAAAATGTTTTCACACCTGAATATATCAGTGCTGTTACCTATGAACACTTGCTTGCTGGATCAGCAACCACTTCCTTTACTTTGTCTTCTGTTGTCTATTTGGTAGCTGCACATCCAGAAGTCGAGAAAAAGTTGCTTGAAGAGATTGATGGGTTTGGTTCAATAGATCATATACCTACTTCTCAAGATCTTCATGACAAATTCCCTTATCTTGATCAGGTGATCAAAGAGGCGATGCGGATTTACATTGTATCACCATTAGTAGCAAGAGAAACATCAAATGAAGTAGAGATTGGAGGTTACCTTCTTCCGAAGGGAACTTGGGTTTGGTTAGCTCTTGGCGTTCTAGCAAAAGATCCGAAAAACTTTCCAGAGCCAGAAAAGTTCAAACCAGAACGGTTTGATCCTAACTGTGAAGAAATGAAACGAAGGCACCCTTATGCTTTCATACCATTTGGAATCGGTCCTCGGGCTTGCATTGGTCAGAAATTTTCCCTACAAGAGATCAAGCTTTCTCTCATCCATTTATACAGAAAATACTTGTTTCGGCATTCACCTAATATGGAAAACCCTTTAGAACTCGAATATGGCATAGTCCTAAACTTCAAGCATGGTGTCAAACTGAGAGCCATAAAAAGAAAATTGAGGAGCTGCTAA 1638 0.3926 MVFIDLEWLFPIPISFSFDSTILFTLLALVGGWLIYLYEPYWKVRKVPGPPSLPLVGHLHLMAKHGPDVFSILAKQYGPIYRFHMGRQPLIIVADAELCKEAGIKKFKDIPNRSTPSPIKASPLHQKGLFFTRDSQWSTMRNTILSVYQPSHLSSLVPTMQSFIESATQNLDSQKEDIVFSNLSLKLATDVIGQAAFGVNFGLSEPHSVRSEIESVNVNKDDVMSASDSNEVTDFINQHIYSTTQLKMDLSGSFSIILGLLVPILQEPFRQILKRIPGTMDWKIERTNKKLGGRLDEIVEKRMNDRTRSSKDFLSLILNARESKAVSENVFTPEYISAVTYEHLLAGSATTSFTLSSVVYLVAAHPEVEKKLLEEIDGFGSIDHIPTSQDLHDKFPYLDQVIKEAMRIYIVSPLVARETSNEVEIGGYLLPKGTWVWLALGVLAKDPKNFPEPEKFKPERFDPNCEEMKRRHPYAFIPFGIGPRACIGQKFSLQEIKLSLIHLYRKYLFRHSPNMENPLELEYGIVLNFKHGVKLRAIKRKLRSC 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g05209 545 PANTHER THROMBOXANE-A SYNTHASE 21 541 - -
Trre6g05209 545 FunFam Cytochrome P450 3A4 34 542 - -
Trre6g05209 545 Gene3D Cytochrome P450 35 544 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g05209 545 Pfam Cytochrome P450 48 527 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g05209 545 SUPERFAMILY Cytochrome P450 40 540 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g05209 545 PRINTS P450 superfamily signature 346 363 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g05209 545 PRINTS P450 superfamily signature 486 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g05209 545 PRINTS P450 superfamily signature 400 411 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g05209 545 PRINTS P450 superfamily signature 477 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g05209 545 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 479 488 IPR017972 GO:0005506|GO:0016705
Trre6g05209 545 PRINTS E-class P450 group I signature 355 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g05209 545 PRINTS E-class P450 group I signature 74 93 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g05209 545 PRINTS E-class P450 group I signature 439 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g05209 545 PRINTS E-class P450 group I signature 335 352 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g05209 545 PRINTS E-class P450 group I signature 399 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g05209 545 PRINTS E-class P450 group I signature 486 509 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g05209 545 PRINTS E-class P450 group I signature 476 486 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g05209 Trre-Chr6 54229030 54234486 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g05209 85 540 Cytochrome P450 AT2G26170 74.781 0.0 675