Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g05206 ATGAGCGGTGAGGATGAAGACCAAGAAGAAAAAGGGTTGAATTTGAAGCGAAATTCTTCTCGGTTCAATAATTTCCAACGCGATCTTATGGCTGGTGCTGTTATGGGTGGTGCTGTTCATACAATTGTGGCTCCAATTGAGAGAGCTAAGCTATTATTGCAGACCCAAGAAAGTAATTTGGCTATTGTTGCGAGCGGTCGTAGAAAATTCAAAGGAATGTTTGATTGTATAATTCGTACTGTTAGGGAAGAAGGTATTATCTCTTTGTGGCGTGGTAATGGTAGCAGTGTTCTTCGTTATTATCCTTCTGTTGCACTCAATTTTTCTCTTAAGGATCTTTACAAAAGCATATTAAGGGGTGGGAACACTAATGCTAATAATCTTTTCTCTGGTGCATCTGCTAATTTTATTGCTGGGGCTGGAGCAGGTTGTACATCGCTTATCTTGGTATACCCCCTTGATATCGCACACACCCGCCTTGCCGCTGACCTCGGAAGGACAGAAGTGCGCCAATTCCGAGGCATTTACCATTTCTTAGCCACTATATTCGAAAAAGAGGGTGTTCGGGGGATTTACAGGGGCCTTCCTGCATCACTACATGGTATGGTGATACATAGAGGTCTTTACTTTGGAGGGTTTGATACCATAAAAGAGATGTTGTCTGAAGAATCTAAACCCGAGTTGGTATTGTGGAAGCGATGGATGGTCGCTCAAGCAGTTACAACCTCTGCCGGTCTGATATCATATCCGCTAGACACGGTTCGACGGAGGATGATGATGCAGTCTGGCATGGAACATCCGGTGTACAATAGCACCTTCGACTGCTGGAGGAAAATTTATCGGACAGAGGGATTGGTTTCGTTTTACCGCGGCGCAGTTTCGAATGTGTTTAGGAGCACTGGAGCTGCAGCTATCTTAGTCTTGTATGATGAGGTCAAGAAATTTATGAATTGGGGAAGATTGTAA 966 0.4389 MSGEDEDQEEKGLNLKRNSSRFNNFQRDLMAGAVMGGAVHTIVAPIERAKLLLQTQESNLAIVASGRRKFKGMFDCIIRTVREEGIISLWRGNGSSVLRYYPSVALNFSLKDLYKSILRGGNTNANNLFSGASANFIAGAGAGCTSLILVYPLDIAHTRLAADLGRTEVRQFRGIYHFLATIFEKEGVRGIYRGLPASLHGMVIHRGLYFGGFDTIKEMLSEESKPELVLWKRWMVAQAVTTSAGLISYPLDTVRRRMMMQSGMEHPVYNSTFDCWRKIYRTEGLVSFYRGAVSNVFRSTGAAAILVLYDEVKKFMNWGRL 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g05206 321 Gene3D Mitochondrial carrier domain 21 316 IPR023395 -
Trre6g05206 321 ProSiteProfiles Solute carrier (Solcar) repeat profile. 23 117 IPR018108 -
Trre6g05206 321 ProSiteProfiles Solute carrier (Solcar) repeat profile. 130 219 IPR018108 -
Trre6g05206 321 PRINTS Mitochondrial carrier protein signature 92 112 IPR002067 GO:0055085
Trre6g05206 321 PRINTS Mitochondrial carrier protein signature 237 259 IPR002067 GO:0055085
Trre6g05206 321 PRINTS Mitochondrial carrier protein signature 28 41 IPR002067 GO:0055085
Trre6g05206 321 PRINTS Mitochondrial carrier protein signature 145 163 IPR002067 GO:0055085
Trre6g05206 321 PRINTS Mitochondrial carrier protein signature 41 55 IPR002067 GO:0055085
Trre6g05206 321 PRINTS Mitochondrial carrier protein signature 192 210 IPR002067 GO:0055085
Trre6g05206 321 PRINTS Adenine nucleotide translocator signature 103 115 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Trre6g05206 321 PRINTS Adenine nucleotide translocator signature 130 143 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Trre6g05206 321 PRINTS Adenine nucleotide translocator signature 70 91 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Trre6g05206 321 PRINTS Adenine nucleotide translocator signature 25 37 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Trre6g05206 321 PRINTS Adenine nucleotide translocator signature 233 249 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Trre6g05206 321 SUPERFAMILY Mitochondrial carrier 22 311 IPR023395 -
Trre6g05206 321 Pfam Mitochondrial carrier protein 24 119 IPR018108 -
Trre6g05206 321 Pfam Mitochondrial carrier protein 133 222 IPR018108 -
Trre6g05206 321 Pfam Mitochondrial carrier protein 230 317 IPR018108 -
Trre6g05206 321 ProSiteProfiles Solute carrier (Solcar) repeat profile. 232 315 IPR018108 -
Trre6g05206 321 FunFam probable ADP,ATP carrier protein At5g56450 27 318 - -
Trre6g05206 321 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 19 318 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g05206 Trre-Chr6 54190883 54196007 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g05206 22 313 Antiporters AT5G13490 39.597 3.41e-63 203
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g05206 K05863 - gmx:100807764 547.74