Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g05164 ATGATCTCATCCTTAACGTTACCATCTGCTACTGCATTAAGAAGACCTTGTTGTAGTTGTAGCATCACTCCATCATCATCATCATCATCATCATCTTTACGAAGACTTGCTCTCTTTCATCTTCTCACTACCGGTGGTATTGTTATCTGGTGCTGCTGCTGCATTTGGTTATTGATTTGGTTATTAGCTCTACCACAACAATCCCAATTATTTGGAGCAAAAGGATCACAATTGTTCAGAATACCAGAAGCTAATGCTGCTGAAAAGCTTGTCCAACCTGACCAAAACTTGTTTGATTGGGTCCAAAATGATAACAGAAGATTTCTACATGTTGTTTACAGTGTTGGAGATTTGGACAAGACTATCAAATTCTACACTGAATGCCTTGGCATGAAGCTGTTGAGAAAACGTGATATACCAGAATACAAATATTCAAATGCATTTCTTGGATATGGGCCTGAAGATTCCTACTTCACAGTTGAACTCACTTATAATTATGGAGTGGATAAATATAACATTGGATCCGGTTTTGGTCATTTTGGTATTGTAGCTGATGATGTTGCAAAGACAGTAAATATTGTAAAAGCAAAAGGGGGAAAGGTTACCAGGGAACCGGGTGTTGTGAAAGGTGGCTCTGTAGTAACTGCTTCCGTTGAAGATCCTAGTGGCGATCTTGATCGTGTCGTAGCCTTCTATCAGAAAGCTGCAGGCATGAAACTTCTCCATAAGATAGACAACCCTGAGGAAAAGTACACAGTAGCTGTGTTGGGTTATGGTCCTGAATCTAATGGTCCTGTTCTAGAACTGACATATAACTACGGCGTCACTAATTATGATAAAGGAAATGGTTATACACAGATTGCAATAGGCACGAATGATGTCTATAAGACTGCAGAAGCAATCAAATTAAGTGGAGGGAAGATTATCCGTGAACCAGGACCCTTACCGGGTATCAACACCAAGATCGTTGTTTGTTTGGACCCCGATGGTTGGAAATTGGTATTTGTTGATAATGTTGATTTTCTGAAGGAATTAGAGTGA 1041 0.3967 MISSLTLPSATALRRPCCSCSITPSSSSSSSSLRRLALFHLLTTGGIVIWCCCCIWLLIWLLALPQQSQLFGAKGSQLFRIPEANAAEKLVQPDQNLFDWVQNDNRRFLHVVYSVGDLDKTIKFYTECLGMKLLRKRDIPEYKYSNAFLGYGPEDSYFTVELTYNYGVDKYNIGSGFGHFGIVADDVAKTVNIVKAKGGKVTREPGVVKGGSVVTASVEDPSGDLDRVVAFYQKAAGMKLLHKIDNPEEKYTVAVLGYGPESNGPVLELTYNYGVTNYDKGNGYTQIAIGTNDVYKTAEAIKLSGGKIIREPGPLPGINTKIVVCLDPDGWKLVFVDNVDFLKELE 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g05164 346 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 106 223 IPR029068 -
Trre6g05164 346 Gene3D - 81 222 IPR029068 -
Trre6g05164 346 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 107 231 IPR037523 -
Trre6g05164 346 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 223 338 IPR037523 -
Trre6g05164 346 Gene3D - 223 346 IPR029068 -
Trre6g05164 346 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 108 223 IPR004360 -
Trre6g05164 346 ProSitePatterns Glyoxalase I signature 1. 110 131 IPR018146 GO:0004462|GO:0046872
Trre6g05164 346 NCBIfam lactoylglutathione lyase 108 223 IPR004361 GO:0004462|GO:0046872
Trre6g05164 346 PANTHER LACTOYLGLUTATHIONE LYASE 223 346 - -
Trre6g05164 346 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 222 339 IPR029068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g05164 Trre-Chr6 53997201 53999337 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g05164 218 337 Calmodulin-binding Proteins AT1G08110 26.897 6.05e-08 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g05164 K01759 - gmx:100810908 483.796