Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g05163 ATGATCTCATCCTTAACGTTACCATCTGCTACTGCATTAAGAAGACCTTGTTGTAGTTGTAGCATCACTCCATCATCATCATCATCATCATCATCTTTACGAAGACTTGCTCTCTTTCATCTTCTCACTACCGGTGGTATTGCTCTACCACAACAATCCCAATTATTTGGAGCAAAAGGATCACAATTGTTCAGAATACCAGAAGCTAATGCTGCTGAAAAGCTTGTCCAACCTGACCAAAACTTGTTTGATTGGGTCCAAAATGATAACAGAAGATTTCTACATGTTGTTTACAGTGTTGGAGATTTGGACAAGACTATCAAATTCTACACTGAATGCCTTGGCATGAAGCTGTTGAGAAAACGTGATATACCAGAATACAAATATTCAAATGCATTTCTTGGATATGGGCCTGAAGATTCCTACTTCACAGTTGAACTCACTTATAATTATGGAGTGGATAAATATAACATTGGATCCGGTTTTGGTCATTTTGGTATTGTAGCTGATGATGTTGCAAAGACAGTAAATATTGTAAAAGCAAAAGGGGGAAAGGTTACCAGGGAACCGGGTGTTGTGAAAGGCGATCTTGATCGTGTCGTAGCCTTCTATCAGAAAGCTGCAGGCATGAAACTTCTCCATAAGATAGACAACCCTGAGGAAAAGTACACAGTAGCTGTGTTGGGTTATGGTCCTGAATCTAATGGTCCTGTTCTAGAACTGACATATAACTACGGCGTCACTAATTATGATAAAGGAAATGGTTATACACAGATTGCAATAGGCACGAATGATGTCTATAAGACTGCAGAAGCAATCAAATTAAGTGGAGGGAAGATTATCCGTGAACCAGGACCCTTACCGGGTATCAACACCAAGATCGTTGTTTGTTTGGACCCCGATGGTTGGAAATTGGTATTTGTTGATAATGTTGATTTTCTGAAGGAATTAGAGTGA 957 0.3939 MISSLTLPSATALRRPCCSCSITPSSSSSSSSLRRLALFHLLTTGGIALPQQSQLFGAKGSQLFRIPEANAAEKLVQPDQNLFDWVQNDNRRFLHVVYSVGDLDKTIKFYTECLGMKLLRKRDIPEYKYSNAFLGYGPEDSYFTVELTYNYGVDKYNIGSGFGHFGIVADDVAKTVNIVKAKGGKVTREPGVVKGDLDRVVAFYQKAAGMKLLHKIDNPEEKYTVAVLGYGPESNGPVLELTYNYGVTNYDKGNGYTQIAIGTNDVYKTAEAIKLSGGKIIREPGPLPGINTKIVVCLDPDGWKLVFVDNVDFLKELE 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g05163 318 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 195 311 IPR029068 -
Trre6g05163 318 ProSitePatterns Glyoxalase I signature 1. 95 116 IPR018146 GO:0004462|GO:0046872
Trre6g05163 318 Gene3D - 195 318 IPR029068 -
Trre6g05163 318 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 194 306 IPR004360 -
Trre6g05163 318 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 93 191 IPR004360 -
Trre6g05163 318 PANTHER LACTOYLGLUTATHIONE LYASE 195 318 - -
Trre6g05163 318 Gene3D - 66 194 IPR029068 -
Trre6g05163 318 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 92 217 IPR037523 -
Trre6g05163 318 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 91 193 IPR029068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g05163 Trre-Chr6 53997201 53999337 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g05163 169 309 Calmodulin-binding Proteins AT1G08110 24.096 5.28e-07 48.1