Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g05102 ATGCAATCAAGTAGTAGGCTTTTGTTGTGTTCCTCCAATTCGTTATTTGGGTCAGCTTCAGCCGTCACTGCCACACCCCCCTCTTGTCTTAGATTCCCACCACTCTCCCTACCCATCACTAATTCATCCTCGATTCGCTTCAAACCCCTCCGCTCCACTTCTTCATCGAGTGACTCTCCGCAATTTACAGAAATGGCATCAAAGGATTCTAAAGATCAAGACCCGCGTATTGCCGGAATTTCATCTGCGATCCGTATCATCCCTGATTTTCCTAAGCCAGGGATTATGTTTCAAGATATAACCACACTGCTTCTCGATACAAAGGCTTTCAAAGATACCATTGACTTGTTTGTTGAGAGGTACAGAGATCAAAACATTTCTGTTGTTGCAGGCGTTGAAGCAAGAGGCTTTATTTTTGGCCCACCCATTGCTTTGGCGATTGGAGCAAAATTTGTCCCAATGAGGAAACCCAAAAAATTGCCAGGAGAGGTTATCTCAGAAGAGTACTCGTTGGAGTATGGAACTGACAAAATAGAAATGCACGTAGGGGCTGTAAAACCTGGTGAAAGAGCCTTAGTCATAGATGATCTTATAGCCACTGGTGGAACCTTATGTGCTGCAATTAAACTACTAGAACGTGTTGGGGTCACTGTTGTTGAGTGCGCTTGTGTGATTGAATTACCGGAGTTAAAGGGGCGAGAAAAGCTGGGTGGCAAGTCTTTGTTCATCTTAGTTGAAGGAGAAGGAGCTTGA 753 0.4449 MQSSSRLLLCSSNSLFGSASAVTATPPSCLRFPPLSLPITNSSSIRFKPLRSTSSSSDSPQFTEMASKDSKDQDPRIAGISSAIRIIPDFPKPGIMFQDITTLLLDTKAFKDTIDLFVERYRDQNISVVAGVEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGTDKIEMHVGAVKPGERALVIDDLIATGGTLCAAIKLLERVGVTVVECACVIELPELKGREKLGGKSLFILVEGEGA 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g05102 250 Pfam Phosphoribosyl transferase domain 106 231 IPR000836 -
Trre6g05102 250 Hamap Adenine phosphoribosyltransferase [apt]. 80 247 IPR005764 GO:0003999|GO:0005737|GO:0006168
Trre6g05102 250 MobiDBLite consensus disorder prediction 48 75 - -
Trre6g05102 250 FunFam Adenine phosphoribosyltransferase 1 68 247 - -
Trre6g05102 250 SUPERFAMILY PRTase-like 69 238 IPR029057 -
Trre6g05102 250 CDD PRTases_typeI 114 246 IPR000836 -
Trre6g05102 250 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 69 246 - -
Trre6g05102 250 MobiDBLite consensus disorder prediction 48 64 - -
Trre6g05102 250 NCBIfam adenine phosphoribosyltransferase 81 245 IPR005764 GO:0003999|GO:0005737|GO:0006168
Trre6g05102 250 Gene3D - 67 247 IPR029057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g05102 Trre-Chr6 53412000 53414924 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g05102 65 246 PRT Gene Family AT1G27450 84.066 7.46e-110 312
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g05102 K00759 - gmx:100305792 343.969