Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g05099 ATGAATATGCTGATTTTCAAGTGTCTTCAGATGGCTTTGCTGCTAGTTTTCTCTAGCAGATACACTATAGCAGAAAAGAAAACACAGAATCCTAAAAGAACATACATAATTCACATGGACAAGTTCAACATGCCAGCAAGTTTCGATGATCATCTCCAATGGTATGATTCATCACTAAAATCTGTATCAGAAACTGCAGAGATGCTGTATACCTACAAACATGTAGCTCATGGCTTCTCCACAAGGCTAACTACTCAAGAAGCAGACTTACTCACAAAGCAACCGGGAATTCTCTTGGTTATCCCTGAAGTTAGATATGAGCTTCACACAACTCGAACACCAGAGTTCCTTGGATTGGAGAAAACAACAAGTCTTCTAGGGTACTCTGGGCAACAAAGCGAGGTGATTGTCGGAGTAATTGACACTGGCGTATGGCCTGAACTAAAAAGCTTCGACGACACTGGACTTGGACCAGTACCCAGTAGCTGGAAAGGGGAATGTGAGACAGGTAAAAACTTTAACTCATCAAACTGTAACAGAAAACTTGTTGGTGCAAGGTTTTTTGCTAAAGGCTATGAGGCGGCTTTTGGACCCATTGACGAAAAGGCAGAATCGAAGTCACCTAGGGATGATGATGGGCATGGAAGTCACACCTCAACTACAGCAGCAGGTTCTGCAGTTGCAGGAGCAAGCCTCTTTGGTTTTGCTTCTGGGACAGCAAAAGGTATGGCCACACAAGCTCGAGTGGCCGCTTACAAAGTGTGTTGGCTTGGTGGGTGCTTTACAACAGACATAGCTGCTGCAATTGACAAGGCCATTGAAGACGGTGTCAACATCCTCTCTATGTCTATTGGTGGAGGTTTAATGGACTACTACAAAGACACTGTTGCACTGGGAACTTTTGCAGCCATGGAACATGGAATACTAGTATCCAGTTCAGCAGGAAATGGTGGACCTAGTCGAGCAACTTTGGCTAATGTTGCGCCGTGGATAACCACTGTGGGTGCTGGAACTATAGACCGTGATTTCCCAGCTTATATCACCCTTGGAAACGGGAAGAGATACAACGGCGTGTCTCTTTACAATGGAAAATTACCACCTGATTCTCCGCTGCCACTTGTTTATGCTGCTAATGTCGGCCAGGATTCGACCGATAGCCTGTGCACCGAAGATAGTTTGATTCCTAGTAAAGTTTCAGGAAAAATAGTGATATGTGACCGAGGAGGAAATCCTAGAGCCGAAAAGAGTTTGGTGGTCAAGCGTGCAGGAGGAATAGGGATGATTTTAGCAAACAAAGAAGATTATGGGGAAGAGCTAGTTGCTGACTCCTATCTCCTCCCTGCAGCAGCTTTGGGAGAGAAAGCAAGCAATGAAGTAAAGAAGTATGTTTCTTCTGCTCCCAATCCAACCGCTAAAATTGCATTCGGCGGTACCCAATTAGGGGTTCAACCATCCCCAGTGGTGGCAGCTTTCAGCTCTAGAGGACCAAATATACTTACTCCAAAAATACTCAAACCGGACCTTATAGCTCCAGGAGTCAACATTCTAGCTGGATGGTCAGGGAAAGTTGGACCAACCGGCTTGGCTGCTGACACAAGGCATGTGAGCTTCAACATCATCTCTGGCACATCCATGTCATGTCCTCATGTAAGTGGCTTAGCTGCTCTTCTTAAAGGAGCTCATCCAGAATGGAGTCCCGCAGCTATAAGGTCTGCCCTCATGACCACATCTTACAGAGCCTACAAAAATGGGCAAACCATAAAAGATGTCGCTACTGGGATACCTGCCACACCGTTTGATTATGGTGCTGGGCATGTGGATCCAGTAGCTGCTCTTGATCCCGGTCTTGTGTATGACACTACCGCGGATGACTACTTGAGCTTCCTCTGTGCCTTGAACTACACTTCATTTCAAATAAAGCTTGTTGCAAGAAGAGAGTTTACCTGTGACAAAAGGATTAAATACAGGGTGGAAGATCTCAATTACCCATCTTTTGCAGTTACATTTGACGCAGCATCAGGCGGAAAGGGTGGTTCTCACAAATCAACCACTGTCCAATACAAGAGGATTTTAACCAACGTAGGGACCCCCACAACTTATAAAGTTTCGGTGTCATCACAGTCTCCTTCGGTTAAGATTACAGTTGAACCACAAATACTTAGTTTCAAGGGGCTGAATGAGAAGAAGAGCTACACTGTTACATTCACATCTAATTCAATGCCCTCTGGTACAACCAGCTTTGCTCATCTGGAATGGTCGGATGGGAAACATAAGGTCACCAGTCCTATTGCTTTCAGCTGGACTTGA 2307 0.4521 MNMLIFKCLQMALLLVFSSRYTIAEKKTQNPKRTYIIHMDKFNMPASFDDHLQWYDSSLKSVSETAEMLYTYKHVAHGFSTRLTTQEADLLTKQPGILLVIPEVRYELHTTRTPEFLGLEKTTSLLGYSGQQSEVIVGVIDTGVWPELKSFDDTGLGPVPSSWKGECETGKNFNSSNCNRKLVGARFFAKGYEAAFGPIDEKAESKSPRDDDGHGSHTSTTAAGSAVAGASLFGFASGTAKGMATQARVAAYKVCWLGGCFTTDIAAAIDKAIEDGVNILSMSIGGGLMDYYKDTVALGTFAAMEHGILVSSSAGNGGPSRATLANVAPWITTVGAGTIDRDFPAYITLGNGKRYNGVSLYNGKLPPDSPLPLVYAANVGQDSTDSLCTEDSLIPSKVSGKIVICDRGGNPRAEKSLVVKRAGGIGMILANKEDYGEELVADSYLLPAAALGEKASNEVKKYVSSAPNPTAKIAFGGTQLGVQPSPVVAAFSSRGPNILTPKILKPDLIAPGVNILAGWSGKVGPTGLAADTRHVSFNIISGTSMSCPHVSGLAALLKGAHPEWSPAAIRSALMTTSYRAYKNGQTIKDVATGIPATPFDYGAGHVDPVAALDPGLVYDTTADDYLSFLCALNYTSFQIKLVARREFTCDKRIKYRVEDLNYPSFAVTFDAASGGKGGSHKSTTVQYKRILTNVGTPTTYKVSVSSQSPSVKITVEPQILSFKGLNEKKSYTVTFTSNSMPSGTTSFAHLEWSDGKHKVTSPIAFSWT 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g05099 768 CDD Peptidases_S8_3 106 578 IPR034197 -
Trre6g05099 768 FunFam Subtilisin-like protease SBT1.5 134 351 - -
Trre6g05099 768 SUPERFAMILY Subtilisin-like 108 616 IPR036852 GO:0004252|GO:0006508
Trre6g05099 768 Pfam Subtilase family 133 603 IPR000209 GO:0006508|GO:0008236
Trre6g05099 768 Gene3D - 340 481 - -
Trre6g05099 768 ProSiteProfiles Serine proteases, subtilase domain profile. 105 612 - -
Trre6g05099 768 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 17 109 IPR037045 -
Trre6g05099 768 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 35 764 IPR045051 -
Trre6g05099 768 FunFam Subtilisin-like protease SBT1.9 23 109 - -
Trre6g05099 768 Gene3D Peptidase S8/S53 domain 135 625 IPR036852 GO:0004252|GO:0006508
Trre6g05099 768 CDD PA_subtilisin_like 346 473 - -
Trre6g05099 768 Pfam PA domain 372 456 IPR003137 -
Trre6g05099 768 MobiDBLite consensus disorder prediction 200 216 - -
Trre6g05099 768 MobiDBLite consensus disorder prediction 200 221 - -
Trre6g05099 768 FunFam subtilisin-like protease SBT1.5 340 480 - -
Trre6g05099 768 ProSitePatterns Serine proteases, subtilase family, serine active site. 542 552 IPR023828 -
Trre6g05099 768 Pfam Peptidase inhibitor I9 34 109 IPR010259 -
Trre6g05099 768 Gene3D - 629 767 - -
Trre6g05099 768 Pfam Fibronectin type-III domain 659 764 IPR041469 -
Trre6g05099 768 PRINTS Subtilisin serine protease family (S8) signature 541 557 IPR015500 -
Trre6g05099 768 PRINTS Subtilisin serine protease family (S8) signature 132 151 IPR015500 -
Trre6g05099 768 PRINTS Subtilisin serine protease family (S8) signature 210 223 IPR015500 -
Trre6g05099 768 SUPERFAMILY PA domain 370 436 IPR046450 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g05099 Trre-Chr6 53381287 53383593 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g05099 34 768 Subtilisin-like Serine Gene Family AT5G67360 65.807 0.0 1009
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g05099 - - gmx:100794284 1257.66