Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g05096 ATGGCAAATCAAAAGGTTTTCACCCTCTCACAAATCTCCCAACACAAGTCCAACAAAAACTGTTGGCTTGTAATCAACGGCAGAGTGTTGGACGTGACAAAGTTTTTGGAGGAACATCCAGGAGGAGAAGAAGTAATTCTAGAGGTTGCAGGGAAAGATGCCACAAAGGAGTTTAATGATATTGGACATAGTAAAGCAGCTCAAAATTTAGTCCTCAAATACCAAGTTGGTGTACTTGAAGGTGCCAAGGTTGAAAAGGTTGATGATATGGATTTTGTTGAGGACAAGGAATCCAAAAGCAAAGAAATGAGTGCTTTTGTTATCAAAGAGGATACTAGTTGCAAAACTGCAACACTTTTAGAGTTGTTTGTGCCAATTCTTTTTGCTTGTATCTATTTTGGTTACAGTGTCATCACCAGAAAAGACACTGTTGGTTACTAA 441 0.3855 MANQKVFTLSQISQHKSNKNCWLVINGRVLDVTKFLEEHPGGEEVILEVAGKDATKEFNDIGHSKAAQNLVLKYQVGVLEGAKVEKVDDMDFVEDKESKSKEMSAFVIKEDTSCKTATLLELFVPILFACIYFGYSVITRKDTVGY 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g05096 146 SMART Cyt_b5_2 7 80 IPR001199 -
Trre6g05096 146 PRINTS Cytochrome B5 signature 54 61 IPR001199 -
Trre6g05096 146 PRINTS Cytochrome B5 signature 67 79 IPR001199 -
Trre6g05096 146 PRINTS Cytochrome B5 signature 29 39 IPR001199 -
Trre6g05096 146 PRINTS Cytochrome B5 signature 39 53 IPR001199 -
Trre6g05096 146 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 35 42 IPR018506 GO:0020037
Trre6g05096 146 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 4 80 IPR001199 -
Trre6g05096 146 FunFam Cytochrome b5 type B 1 84 - -
Trre6g05096 146 Pfam Cytochrome b5-like Heme/Steroid binding domain 8 79 IPR001199 -
Trre6g05096 146 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 4 84 IPR036400 -
Trre6g05096 146 PANTHER CYTOCHROME B5 3 135 - -
Trre6g05096 146 Gene3D - 1 85 IPR036400 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g05096 Trre-Chr6 53372362 53373241 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g05096 2 140 NADPH P450 reductases AT5G48810 44.056 2.32e-35 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g05096 - - mtr:112420340 236.113