Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g05084 ATGTTTTCTCCGTCTGGGAGAGCCACTCTCTTCTCTGGCAATCGAAGCTTCGAAGAAATTCTAGAGCGATATGTAAATCTTTCAGACAGTGAACGCGGAAGGCTGAATAATGAAGAGCACATTCGAAAGCTTCTCCGTAAGTTGAGAGTTGAAACCGATCAAATTTGTCAAGTTCCTAGCCCTATGGTTACAGACTCTCAACTCAAGGAGGTTCAAAGAGAAATTTTGATTTGCAAGACTCAATTGGAAGAGATGAAGAATCGACTAAGGGCATTTGAAGGAGATCCTTCTGAGATCACCACATTGTATGAAGCTGAATATCGTGAACAAGTACTTCAGGAAACTCTACAACGAGTGCAACTGCGAAAATGCTTTTTAGAGGAAGAACATATTTCTCATGCATCTCCACAGGTACATCTTACAAAAACTGTAGATGTAGATGGCTTTGTTGCTGGAACTACAGAGAATGCATTAGGCTGGTTTCCGCAGGGAGATACCAACGATCAGATTCTGAACTTTGTTAATGCTTATGGCCCTTCGCCTCTCAGTGATCAACAATCAATGAGTGCTATTGCTAATATGGTAATGCCAACTTCGACCCTTATGCATTCTGCAAACATCAATCGCGATTGCCAAATTATTCCCGGGGATGGTACAAAGGCTGACATCAATAATACACTGAATACTCAGTTTGGACAAGTTACAGACAACAATTTGTCCTCTTGGGAGCATCTCCACCATTTAGAGAATGGTGCATTGTCAGTTGCAGAGACAAGAGAAGGACAACTACTGGAACAATATCTTTCTCAAGTTGCCCTGACAAATGTTTTCATGAGTAGTGAAGGTCAACTTCAAACATGA 861 0.4135 MFSPSGRATLFSGNRSFEEILERYVNLSDSERGRLNNEEHIRKLLRKLRVETDQICQVPSPMVTDSQLKEVQREILICKTQLEEMKNRLRAFEGDPSEITTLYEAEYREQVLQETLQRVQLRKCFLEEEHISHASPQVHLTKTVDVDGFVAGTTENALGWFPQGDTNDQILNFVNAYGPSPLSDQQSMSAIANMVMPTSTLMHSANINRDCQIIPGDGTKADINNTLNTQFGQVTDNNLSSWEHLHHLENGALSVAETREGQLLEQYLSQVALTNVFMSSEGQLQT 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g05084 286 Coils Coil 68 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g05084 Trre-Chr6 53273277 53275300 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g05084 1 167 Type I MADS-box Gene Family AT1G22130 32.222 4.11e-20 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g05084 - - tpra:123918189 488.419