Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g05024 ATGTCATCTATGCACTACATCCAAAAAGGCCTATTATTCAAAAAGCCTCAAACATCACCAAATAACCAACAAGATTTCATTGACAATTTGTTGAAGAAGCTAAAAAACTCCCTCTCTCATGCTCTTTTCTATTTCTATCCTCTTTCTGGCCATCTTGTCACTCACAAAACTCAAGACCCTCACTCTTATACTATTTTTGTTGATTGTAGTAACAATAACCCCGGAGCTAGATTCATCTATGCAACCGCGGACGCGGCCATTTCTGATATCCTCGCTCCGGTTGATGTTCCTCCGGTTGTTGAGTCATTTTTTGATCTCAACAAAGCAACCAACCATGACGGTCACACCATTCCGTTGTTATCAATTCAAGTCACGGAGCTCGTTGATGGTGTTTTCGTAGGTTGTTCCATGAATCATTGTATTGGTGACGAAGACTACGGTCCACCAACCAACCTTCCCTTCAAACATCACCAAGAATTCATTAGCGAATATAAATCTCCGATCCTCAGAGATAGATTCTTCCATTTTACAAAAGACTATATTGCAAAACTAAAATCAAAGGCGAATAACGAGTTTAACACAACAAAGATATCTTCATTTCAAGCCTTATCAGCACATGTTTGGCGATGTGTGACACGCGCACGCCAACTAACAAACAATCAAAAAACAAGTTGTAAATTAGCGATAAACAATCGATCAAGAATGGAACCTCCTTTGCCAAAAGAGTATTTTGGAAATGCAATTGATGTGGTTAGTGTTGAAACAACTGTTGAGGAGTTGCTTAAGAACAATCTAGGATGGGCAGCAATGAAGGTTAATGAAATTGTGGTGAATCATGATGACAAAGAAGTGAGAAAAATGTTAAAGAAATGGTTAGAGTCTCCTATTGTATACCAACTTGGTTGTCACTTTGATCCTCATAGTATCACAGTGTCAGGTTCACCAAGGTTCAATATGTATGGGAATGAATTTGGAATGGGGAAAGCAATAGCTGTTCTTAGTGGATATGCTAATAAATTTGATGGTAATGTGTCATCATATCAAGGGTATGAAGAAGGAAGCATAGATTTGGCATTGACTCTTATGCCTGATGCAATGAAAGTGTTGGAATCAGATGAGGAGTTCATGAATGCAGTTTGA 1140 0.3851 MSSMHYIQKGLLFKKPQTSPNNQQDFIDNLLKKLKNSLSHALFYFYPLSGHLVTHKTQDPHSYTIFVDCSNNNPGARFIYATADAAISDILAPVDVPPVVESFFDLNKATNHDGHTIPLLSIQVTELVDGVFVGCSMNHCIGDEDYGPPTNLPFKHHQEFISEYKSPILRDRFFHFTKDYIAKLKSKANNEFNTTKISSFQALSAHVWRCVTRARQLTNNQKTSCKLAINNRSRMEPPLPKEYFGNAIDVVSVETTVEELLKNNLGWAAMKVNEIVVNHDDKEVRKMLKKWLESPIVYQLGCHFDPHSITVSGSPRFNMYGNEFGMGKAIAVLSGYANKFDGNVSSYQGYEEGSIDLALTLMPDAMKVLESDEEFMNAV 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g05024 379 Gene3D - 1 145 IPR023213 -
Trre6g05024 379 FunFam Tryptamine hydroxycinnamoyl transferase 155 372 - -
Trre6g05024 379 Pfam Transferase family 167 376 - -
Trre6g05024 379 Pfam Transferase family 3 143 - -
Trre6g05024 379 Gene3D - 155 371 IPR023213 -
Trre6g05024 379 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 147 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g05024 Trre-Chr6 52781031 52782292 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g05024 20 370 Monolignol Biosynthesis Gene Families AT5G48930 27.569 5.57e-31 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g05024 - - lja:Lj1g3v1664450.1 520.776