Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g05022 ATGTCGTCAATGAACTATATCCAGAAAGGCCTTTTATTCAAAAAACCAAATAACCAACAAGATTTCGTCGAAAATCTATTGGAGAAGCTCAAACACTCACTCTCTATAGCGCTATTCCATTTCTATCCTCTGTCTGGTCGCGTCGTTACACAAAAATCTCAAGACCCTCCCTCTTATGTTATTTTCGTTGATTGCAGTAACAATAACCCGGGAGCTAAATTTATCTACACAACTTTGGATATGACCGTATCTGATATCCTTACCCCGACAGATGTTCCGCAGATTGTTAAGTCGTTGTTTGATCTCGATAAAGCAATCAATCACGACGGTCACACTGTGCCCTTGTTATCTATACAAGTCACTGAGCTAGTGGACGGTGTTTTCGTAGGTTGTTCCATGAATCATTATATTGGTGATGGAACTTCTTATTGGAATTTTTTTAATATATGGTCTGAAATATTTCAAGCTCAAGACCAAGGGCGCGATGTTCCCATTTCGCGTGAACCCTTGCACAATCGTTGGTTTCCAGAAGGTTATGGTCCACTAATCAATCTTCCATTCAAACATCATGACGAGTTTATAAGTAGATATGAAGCGCCCGAGTTGGTAGAGAGATTCTTCCACTTTACAGCAGAGTCTATTGCGAAATTGAAAGCAAAGGCCAATATCGAGTCTAATACAAACAAAATCTCTTCGTTCCAATCCTTAACTGCACATGTTTGGAGATGTATAACTCGTGCTCGCGGCATATCAAATGATCAAATAACAACTTGTATGTTAGCTGTTAACAATCGTCCGAGAATAAAACCATCTCTTCCGGATGAGTACTTTGGGACCTCAATTGATACGGTAGCTACACAAGTGACCGTAGGAGAATTGCTTGAGAATGATTTAGGATGGGCAGCATTGAAGGTGCATGTTGCTATTGCAAACCATAACGACCTAGAAGTGCGAAAGATAGTCAAAAAGTGGTTAGAATCTCCGACTATATTCAGCCTTAACCGCCACTTACATCCCTTTAGTGTCGCGATGATAAGTTCACCGAGGTTTAATATGTATGGGAATGAATTTGGAATGGGAAAACCAGTGGCAGTTCTTAGTGGTAATGCAAACAAATGTGATGGTAATGTGACATCATACGAGGGGCGCGAAGGAGAGGGGAGCATAGATTTTGAAATTTCTTTGTCTATAAATGCAATGAGAGCACTCGAATCGGACGATAATTTCATGAATGCAGCTTCAGTGACCAATCCCTCTAATTAA 1263 0.403 MSSMNYIQKGLLFKKPNNQQDFVENLLEKLKHSLSIALFHFYPLSGRVVTQKSQDPPSYVIFVDCSNNNPGAKFIYTTLDMTVSDILTPTDVPQIVKSLFDLDKAINHDGHTVPLLSIQVTELVDGVFVGCSMNHYIGDGTSYWNFFNIWSEIFQAQDQGRDVPISREPLHNRWFPEGYGPLINLPFKHHDEFISRYEAPELVERFFHFTAESIAKLKAKANIESNTNKISSFQSLTAHVWRCITRARGISNDQITTCMLAVNNRPRIKPSLPDEYFGTSIDTVATQVTVGELLENDLGWAALKVHVAIANHNDLEVRKIVKKWLESPTIFSLNRHLHPFSVAMISSPRFNMYGNEFGMGKPVAVLSGNANKCDGNVTSYEGREGEGSIDFEISLSINAMRALESDDNFMNAASVTNPSN 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g05022 420 FunFam Tryptamine hydroxycinnamoyl transferase 188 406 - -
Trre6g05022 420 Gene3D - 1 182 IPR023213 -
Trre6g05022 420 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 1 411 - -
Trre6g05022 420 Pfam Transferase family 3 409 - -
Trre6g05022 420 Gene3D - 191 405 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g05022 Trre-Chr6 52773555 52774817 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g05022 13 404 Monolignol Biosynthesis Gene Families AT5G48930 28.224 7.97e-39 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g05022 - - lja:Lj1g3v1664450.1 597.816