Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g04985 ATGGATCCAACCTATCCAGAAATCTCCATAGATGTTCCTCCATACCTTCGAGTACACAAAAACGGAACCGTCGAAAGATTAGCCGGCATTCACGTCGTTCCTCCCGGCATCGATCCTCAAACCAAAGTTATCTCCAAAGACATCACAATCATCCCAAAAACTGGTCTCAACGCAAGACTCTACTCACCTAACAATTCCAATTCAAAAAAACTACCTTTAATCATCTACTTCCATGGTGGTGCCTATTGTATATCTTCATCCTCTGACCCTCTTTACCATAACTCCCTCAACAAACTCGTAGCTGAAGCAAACATCATAGCTATATCTGTTAATTACCGGTTAGTGCCGGAACATCCTCTTCCGACCGCTTACGATGATTCTTGGGAAGCACTTCAATGGATTGCTTCACACACAATTGAAAATCATGAAGAAAATCATGAAAACTTGATCAAAGAAAAAGTTGACTTTAACAAAGTTTTCTTAGCAGGTGATAGTGCTGGTGCTAACATAGGACACTACATGTCTTTAAAGTTGAATGTTCTTAATCATTTGAATTTTAAAGTTTTGGGTCTTATTATGGTGAATCCTTATTTTTGGGGTAAGGAACCAATTGGTGTTGAAATAAGTGATTATGAGAGAAAAAAAATGGTTGATAAATGGTGGGAATTTGTTTGTCCTTCTGATAAAGGAAATGATGATCCTTTGATTAATCCGTTTGTGGAAGAAGCTCCTAATCTTGAAGAAGTTGGTGTTGAAAAAGTGCTTATTACTGTTTGTGAGAAAGATATATTAAGGGAAAGAGGGAAACTTTATCATAAGAAATTGGTTAATAGTGGTTGGAAAGGTACTGCTGAGTTTTATGAAACTCAAGAGGAAGATCATGTGTTTCATATTTTTAATCCAGATTGTGATAAAGCTAAGAATTTGATTAAACGCATAGCTGATTTCATCAATGAATAG 960 0.3656 MDPTYPEISIDVPPYLRVHKNGTVERLAGIHVVPPGIDPQTKVISKDITIIPKTGLNARLYSPNNSNSKKLPLIIYFHGGAYCISSSSDPLYHNSLNKLVAEANIIAISVNYRLVPEHPLPTAYDDSWEALQWIASHTIENHEENHENLIKEKVDFNKVFLAGDSAGANIGHYMSLKLNVLNHLNFKVLGLIMVNPYFWGKEPIGVEISDYERKKMVDKWWEFVCPSDKGNDDPLINPFVEEAPNLEEVGVEKVLITVCEKDILRERGKLYHKKLVNSGWKGTAEFYETQEEDHVFHIFNPDCDKAKNLIKRIADFINE 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g04985 319 PANTHER ARYLACETAMIDE DEACETYLASE 11 304 - -
Trre6g04985 319 Coils Coil 139 159 - -
Trre6g04985 319 Pfam alpha/beta hydrolase fold 74 297 IPR013094 GO:0016787
Trre6g04985 319 Coils Coil 303 319 - -
Trre6g04985 319 Gene3D alpha/beta hydrolase 17 319 IPR029058 -
Trre6g04985 319 SUPERFAMILY alpha/beta-Hydrolases 14 319 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g04985 Trre-Chr6 52471710 52472669 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g04985 7 317 Carbohydrate Esterase AT3G48700 41.231 1.58e-83 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g04985 - - var:108341277 480.715