Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g04968 ATGGACGACGTTGCCGGAATCAGTTGCGGACGTTCTTGCCGGAAAAGGAATGAGAGGAGATCAAGAGTAGTGCAGACCACGGATCCTGAAAGAAATTATCATTGCTTTTACCAGTTGTGTGCATCTGAAAGGGATGTAGAAAAGTACAAGTTCGGACATCCAAGTCATTTCCACTATTTGAATCAAAGTAAAGTTTATGAATTAGATGGGGTAAGCAGCACAGAAGAATACATAAAGACGAGAAGAACAATGAATATTGTTGGCATAAGTCACGAGGATCAGGAAGCCATATTTCGCACCTTAGCTGCAATTTTACATCTGGGAAATGTTGAATTTTCTCCTGGGAAAGAGCATGACTCGTCAATAATAAAGGATGAGAAATCAACATTTCATTTGCAGATGGCTGCTAATCTTTTCAAGTGTGATCTGAACCTACTACGAGCAACATTATGTACTCGTACAATACAAATCCGCGAAGGAAATATTGTCAAAGCTTTTGATTGCAATGCGGCTGTTGCTGGCAGGGATGTTTTGGCGAAAACTGTCTATGCTCGTTTGTTTGATTGGTTTTTTGATAAGATCAATAAAACGGTTGGGCAAGATATCAATTCCAGGATGCAAATTGGAATATTGGATATAATGGCTTTGAGTCTTTTAAGGATAACAGTTTTGAGCAATTCTGCATCAATTTTGCAAACGAAAAGCTTCAACAACATTTTAATGAGGTATGAAATTATGCTATGTATGTTAATTGCCTTGACCAAGTTAGTTCCCTGGTGTTTTGATCTGGATCTTGATATTGCTTTTACTCCGTCATCTTACAGCTTCTTCCGTCTCTTGTAA 843 0.3843 MDDVAGISCGRSCRKRNERRSRVVQTTDPERNYHCFYQLCASERDVEKYKFGHPSHFHYLNQSKVYELDGVSSTEEYIKTRRTMNIVGISHEDQEAIFRTLAAILHLGNVEFSPGKEHDSSIIKDEKSTFHLQMAANLFKCDLNLLRATLCTRTIQIREGNIVKAFDCNAAVAGRDVLAKTVYARLFDWFFDKINKTVGQDINSRMQIGILDIMALSLLRITVLSNSASILQTKSFNNILMRYEIMLCMLIALTKLVPWCFDLDLDIAFTPSSYSFFRLL 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g04968 280 Gene3D Myosin VI head, motor domain, U50 subdomain 90 226 - -
Trre6g04968 280 FunFam Myosin heavy chain 31 85 - -
Trre6g04968 280 ProSiteProfiles Myosin motor domain profile. 1 280 IPR001609 GO:0003774|GO:0005524|GO:0016459
Trre6g04968 280 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 20 214 IPR027417 -
Trre6g04968 280 Pfam Myosin head (motor domain) 20 216 IPR001609 GO:0003774|GO:0005524|GO:0016459
Trre6g04968 280 PANTHER MYOSIN 10 214 - -
Trre6g04968 280 Gene3D - 31 88 - -
Trre6g04968 280 SMART MYSc_2a 1 278 IPR001609 GO:0003774|GO:0005524|GO:0016459
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g04968 Trre-Chr6 52328903 52332752 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g04968 3 220 Myosins gene family AT4G33200 67.431 4.15e-96 307
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g04968 K10357 - gmx:100796413 350.903