Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g04919 ATGCAAGCCCCAGGCTGCTTTCTCTTGTTCTCATTTGTCCTCTTTTCATCAACATCAATTTTATCCCATGCACTTTCAAATGAAGAAGTTTCTTTCATCGCCCGTCGTCAATTGTTACACCTTCAAGAAAACGAGGATTTACCTGAAAACTTCGCAGATACTTATCAAACAAATTTAACTTTTCCTAATGATGGAATCAAACGTGCTTACATAGCACTTCAAGCATGGAAAAATGCAATTTATTCAGACCCATCAAATGTCACGACGAATTGGGTGGGTCCTGATGTATGTTCCTACCAAGGAGTTTTTTGTGCACCTTCTCTTAATGATTCAAAAGTTGAAGTTGTAGCTGGAATTGATCTTAATCATGCAGACATTGCAGGTTATATTCCTTCAGAATTTGGTTTGTTGACCGATCTTGCTCTTTTCCATATAAACACAAACAGATTTTGTGGTATTATCCCAAAAAGCTTCTCCAAGTTAAAGCTTTTGTATGAGATGGATATTAGTAACAACCGCTTTGTTGGAAGATTTCCCACACCTGTTCTTTCAATTCCTGATATCAAATACATGGATATCAGGTACAATGATTTTGAAGGAGAAATTCCTTCCGAGCTTTTTAATAAACCACTCGACGCTATATTTATGAACAACAACAGATTCACATCAACAATTCCAGAGAATTTGGGAAATTCTCCTGCATCAGTTGTTGTTTTGGCCCATAACCATCTTAGTGGATGTATTCCTGCAAGCATTGGTGACATGAAAAATACATTGAACGAATTTGTTGTATTAAACAATAATCTCACCGGTTGTTTGCCTTCAGAAATTGGAAAGCTTGAACAAGTCACCGTTTTTGACGTGAGTCAAAATGTGCTTGTTGGTATGTTGCCAAAGACATGCAATGGCCTCAATAAAGTGGAAGTTTTGTCTATTGCAGATAACAAACTTACAGGTTTTGTTCCAAGAAGTATATGTAGTCTGTCTAATTTGGGGAACTTTACATTCTCAAATAACTATTTCAATGGTGAGGAAGAAGGATGTGTTCCTCCTAGAAAAAACATTTTGTTGGATGATACTTATAATTGTATACCTGACAGACCAAAACAAAAGACATCAAATGATTGCAATGTTGTTATAAGCAAACCTGTTGATTGTAGCAAGACACAATGTGTTAGTGGTAGCCCATCTCACTCCAATTCTCCACCAAGTGATCAAAATCAAACACCAACACCTTCTATTCCAAAGCCTGAGCCAAATCCAACGCCAAAACCTTCAACTCCTTCAAATCCTCCAAGTGAGAACCCAACACCTTCAGTGCCAAAGCCACAACCACAACCTACCCCATCTCCCTCAAAGCCACAACCTAAACCTACACCTACACCTTCCAACCCTTCACCAAAACCAACTCCATCAACACCAACTACAAAGCCAACACCTACACCTTCTAACCCTTCCCCAAAACCAACTCCATCATCACCAACTACAAAGCCAACACCTACACCTTCCAATCCTTCACCAAAACCAACTCCATCAACACCAACTACAAAGCCAACACCTACACCTTCCAACCCTTCACCAAAGCCACCACCAACACCTACACCTTCTAACCCTTCACCAAAGCCAACACCTACACCTTCTAACCCTTCACCAAAGCCAACGCCATCAACACCAAATCCAAAGCCAACACCTACACCTTCAACACCAAGCGAGAAGCCACAACCTAAACCAACTCCGTCACCATCTAATCCAACACCAAGTGAGAAGCCAACCCCAAATCCACAACCCAAACCAACCCCAATCCCATCGCCATTGAATCCACCACCAAGTGAGAAGCATACACCAAAGCCACAACCCAAACCAACCCCGTCACCATCCAATCCACCACCAAGTGAGAAGCCTACACCAAAACCACAACCCAAACCAACACCAACACCAACCCCATCATCACCATCCAATCCACCATCAAGTGATAGACCGACACCGAAACCACAACCACCACCAACCCCTTCTACACCTAAAGTGCAACCACCATCTGAAGATGATCCTCACAAAGAATCACCCAAAAGAAGGACAAGATCTCCACCACCACCAATTCACTCCCCGCCACCACCAGTTCATTCTCCTCCACCGCCAGTCCACTCACCACCGCCACCGGTCCACTCTCCACCACCACCAGTTCAATCACCACCACCACCAGTCCACTCTCCACCGCCACCAGTCCATTCACCACCTCCACCGGTCCACTCACCACCGCCACCAGTTCACTCACCACCTCCACCAGTCCACTCTCCACCGCCACCAGTCCATTCACCACCTCCACCGGTTCATTCCCCACCTCCACCAGTACACTCACCACCACCTCCTGTTCATTCACCTCCTCCACCAGTTCACTCCCCACCTCCACCAGTACATTCTCCTCCTCCTCCCGTCCACTCTCCACCGCCACCTGTTCATTCTCCACCACCGCCTGTGCATTCTCCACCTCCGCCAATTAGATCCCCACCACCACCTGTTCACTCTCCTCCTCCACCTGTTCACTCCCCACCACCACCTGTTCACTCTCCTCCTCCGCCAGTTCAGTCGCCGCCACCACCAGTTTTCTCACCGCCACCACCAGTTCACTCCCCACCTCCACCTACTGCATCACCACCTCCTCCTGTTTATGCACCGCCTCCACAAGAAGATGATATTGTTCTTCCCCCTCACTTTGGTTCTTCATATGCTTCACCCCCTCCACCAATCATTGCTGGATACTAA 2760 0.4565 MQAPGCFLLFSFVLFSSTSILSHALSNEEVSFIARRQLLHLQENEDLPENFADTYQTNLTFPNDGIKRAYIALQAWKNAIYSDPSNVTTNWVGPDVCSYQGVFCAPSLNDSKVEVVAGIDLNHADIAGYIPSEFGLLTDLALFHINTNRFCGIIPKSFSKLKLLYEMDISNNRFVGRFPTPVLSIPDIKYMDIRYNDFEGEIPSELFNKPLDAIFMNNNRFTSTIPENLGNSPASVVVLAHNHLSGCIPASIGDMKNTLNEFVVLNNNLTGCLPSEIGKLEQVTVFDVSQNVLVGMLPKTCNGLNKVEVLSIADNKLTGFVPRSICSLSNLGNFTFSNNYFNGEEEGCVPPRKNILLDDTYNCIPDRPKQKTSNDCNVVISKPVDCSKTQCVSGSPSHSNSPPSDQNQTPTPSIPKPEPNPTPKPSTPSNPPSENPTPSVPKPQPQPTPSPSKPQPKPTPTPSNPSPKPTPSTPTTKPTPTPSNPSPKPTPSSPTTKPTPTPSNPSPKPTPSTPTTKPTPTPSNPSPKPPPTPTPSNPSPKPTPTPSNPSPKPTPSTPNPKPTPTPSTPSEKPQPKPTPSPSNPTPSEKPTPNPQPKPTPIPSPLNPPPSEKHTPKPQPKPTPSPSNPPPSEKPTPKPQPKPTPTPTPSSPSNPPSSDRPTPKPQPPPTPSTPKVQPPSEDDPHKESPKRRTRSPPPPIHSPPPPVHSPPPPVHSPPPPVHSPPPPVQSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPIRSPPPPVHSPPPPVHSPPPPVHSPPPPVQSPPPPVFSPPPPVHSPPPPTASPPPPVYAPPPQEDDIVLPPHFGSSYASPPPPIIAGY 919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g04919 919 MobiDBLite consensus disorder prediction 694 898 - -
Trre6g04919 919 MobiDBLite consensus disorder prediction 388 407 - -
Trre6g04919 919 MobiDBLite consensus disorder prediction 388 919 - -
Trre6g04919 919 PRINTS Proline rich extensin signature 441 458 - -
Trre6g04919 919 PRINTS Proline rich extensin signature 421 437 - -
Trre6g04919 919 PRINTS Proline rich extensin signature 399 420 - -
Trre6g04919 919 PRINTS Proline rich extensin signature 460 485 - -
Trre6g04919 919 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 9 795 - -
Trre6g04919 919 SUPERFAMILY L domain-like 70 357 - -
Trre6g04919 919 MobiDBLite consensus disorder prediction 408 677 - -
Trre6g04919 919 FunFam Leucine-rich repeat extensin-like protein 1 70 231 - -
Trre6g04919 919 Gene3D Ribonuclease Inhibitor 69 354 IPR032675 -
Trre6g04919 919 MobiDBLite consensus disorder prediction 678 693 - -
Trre6g04919 919 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 255 344 - -
Trre6g04919 919 Pfam Leucine rich repeat N-terminal domain 72 104 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g04919 Trre-Chr6 51943484 51946243 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g04919 24 491 Trihelix Transcription Factor Family AT4G33970 56.568 1.89e-179 534
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g04919 - - gmx:100780677 611.298