Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g04892 ATGGTGAAGTTCCTTATCCTATTTGTATTTGAGTTCCTTATCCTATTACACCTTATCTTTGCAACATCTGAATCCAATATTGTGAAGTTCCTTCCTGGTTTTCAAGGGCCACTTCCTTTTCTACTAGAAACTGGATACATTGAAGTAAGTGAATTTGAAAGAGATGAAAATGCAGAACTGTTTTACTTCTTTATAGAATCTGAGAATAATCCTAAGGAAGATCCTCTCTTGCTTTGGCTTACCGGTGGCCCTGGTTGCTCTGCCTTCTCCGGCCTTGCCTTTGAAATAGGTCCAATAACATTTATAAATGATGAATACAATGGGAGCTTACCAAATTTGGCATTGAAGTCACATTCATGGACAAAGGTTAGTAATATTATATTTTTGGATTTGCCTGCTGGTACTGGATTCTCATATCCCAAAACAGAAGCTGCTGTTCAGCAAAGCACTTGGAAACTAGTTCACAATGCTCATCAATTTCTTAGGAAGTGGCTGAATGATCATCCAAAATTTCTATCAAATGAAGTGTACATTGCTGGTGACTCATACTCGGGCCTTCCTGTCCCAATTATTGTTCAAGAGATTTCATATGGAAATGATGATGGCCTCCAACCGTGGATAAACCTCCAAGGATACATACTGGGAAATCCCGTTACAACACCAAAAAGAGATAATTACAAAATACCATTTAGTCATGGCATGGCACTAATTTCTGATGAACTCTACCAGTCCCTAGAAAAGAACTGTAGAGGGGAGTATAAACATATAGATCCCAAAAACGTATTTTGTTTGAAAGATTTCCAATCCTACACGGAGACTATTTCAGGAGTATTTGAGGGTCACATTTTGGAACCGAAATGTGAATCTGATTTTTATAATCAAGTGGAAGTTCCTAGTAGGAGACTGATTGATAAGGCTCACAACATTTTTAGTCCTTCTCTCACTATGCCACCTTTAAATTGTCGGACTTATGCATATTTCCTCGGTCCCTATTGGGCTAACGACGATAATGTTCGCAAAGCACTGCACATTCGAAAGGGAAGTATAAAAAAATGGAAGCGATGTAACGACGACATACCATTTAAGCATGAAATCATTAACAGCTTCCCATATCATACAAATATTAGCAGAAAAGGTTTTCGTTCATTAATATACAGCGGGGATCATGACATGAAAGTTCCATTCTTGGAGACTCAAGCGTGGATAAGATCTTTAAACTATTCCATTGTTGATGATTGGATTGGAGGCAATGGTATTCTAATGCTCAAGTATCAGGATACACTAGGACTTACTCAAATCGGATGA 1305 0.3808 MVKFLILFVFEFLILLHLIFATSESNIVKFLPGFQGPLPFLLETGYIEVSEFERDENAELFYFFIESENNPKEDPLLLWLTGGPGCSAFSGLAFEIGPITFINDEYNGSLPNLALKSHSWTKVSNIIFLDLPAGTGFSYPKTEAAVQQSTWKLVHNAHQFLRKWLNDHPKFLSNEVYIAGDSYSGLPVPIIVQEISYGNDDGLQPWINLQGYILGNPVTTPKRDNYKIPFSHGMALISDELYQSLEKNCRGEYKHIDPKNVFCLKDFQSYTETISGVFEGHILEPKCESDFYNQVEVPSRRLIDKAHNIFSPSLTMPPLNCRTYAYFLGPYWANDDNVRKALHIRKGSIKKWKRCNDDIPFKHEIINSFPYHTNISRKGFRSLIYSGDHDMKVPFLETQAWIRSLNYSIVDDWIGGNGILMLKYQDTLGLTQIG 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g04892 434 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 27 415 IPR001563 GO:0004185|GO:0006508
Trre6g04892 434 PRINTS Carboxypeptidase C serine protease (S10) family signature 129 139 IPR001563 GO:0004185|GO:0006508
Trre6g04892 434 PRINTS Carboxypeptidase C serine protease (S10) family signature 164 189 IPR001563 GO:0004185|GO:0006508
Trre6g04892 434 PRINTS Carboxypeptidase C serine protease (S10) family signature 116 128 IPR001563 GO:0004185|GO:0006508
Trre6g04892 434 SUPERFAMILY alpha/beta-Hydrolases 28 413 IPR029058 -
Trre6g04892 434 Gene3D alpha/beta hydrolase 38 420 IPR029058 -
Trre6g04892 434 Pfam Serine carboxypeptidase 32 413 IPR001563 GO:0004185|GO:0006508
Trre6g04892 434 FunFam Serine carboxypeptidase-like 19 21 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g04892 Trre-Chr6 51700684 51703519 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g04892 26 52 Calmodulin-binding Proteins AT2G22960 70.370 1.68e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g04892 K16296 - gmx:100792006 536.569