Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g04883 ATGGCATATTCGGGATCAATTCGATTGTTTCATGACATTAAGCAATACAGTAGTAATAATGGAAGCTGTAGTTTTTGCCATAAACTCAATTCCGGTAATCGATTATGTTTTGTCGCCTTCAATCATCCGTGGCATAGTTTGAGGATGGATTCTTCAGCACTCATCTTTTCCAGATTACATGTCCAAATTAAGCCTGTACCTTCTAGATGTAATGTTTTGCTGTGCCGATCTGCTCTTGTACCGGCTGGAGGGTGTGAGGCTCCACTGATGAAAGTGGCTACTGTTTCTTTGTCAAGGTCATATACTGCTATATCAGGAGCACCAATTGTGCTTCAATTGATCCCTGCCCTTGGTATCATTGGCTTTGCCGCCTTTGGTCTTGAACCTCTCATGCGGCTTTGTAGGGCTCTATTTCTCCAAGAATGGAATGATAAAAGTTGGAAGAAAAGTAATTCACGTTATATAATGACATCTTATTTTCAACCTTTGCTGCTGTGGACTGGGGTAATGCTCATCTGCAGGTGTTTAGATCCACTAGTCCTACAATCAGAAACCCGTCCGGTTATAAAGCAAAGGCTGTTGAGTTTCGTCAGATCTTTTTCAACTGTGTTTACACTTGCTTATTGTTCTTCAAGCTTTGTTCGACAAGCACAAAACTTCTATAAGGAGACAAATGACACCAATAATGAAAGAAAAATGAGCATTGATCTTATCGGGAAAGCTGTATATACTGCAATATGGGTTGCTGCCGTGTCATTGTTCATGGAGTTGCTTGGTCTCTCCACACAGAAGTGGTTGACTGCTGGTGGGATGGGTACAATATTGCTTTCGCTTGCAGGTCGTGAGATATTCACAAACTTCCTTTCAAGTATGATGATTCATGCAACTCGACCATTTGTTGTGAACGAGCGAATTAAAACAAAGATTAAAGGATATGAGGTTTCTGGTAGGGTTGAGCATGTAGGTTGGTGGTCACCAACAATAGTTAGAGGTGCTGATTGCGAAGCTGTTCACATTCCTAATCATAAATTGAGTGTAAATGTTGTGAGAAATCTTAGTAAGAAAACTCATTGGCGCATCAAAACTCACCTGGCTATCAGTCACTTGGATATTAACAAGATTAATATCATCATAGCTGATATGCGCAAGGTTTTGGCTAAAAATCCTTTAGTAGAGCAGAAAAAATTGCACAGACGAGTTTTTCTGGAGGATGTCAATCCAGAAAATCAGGCTCTTATGATATTAGTATCTTGCTTTGTTAAAACTTCACATTCCGAAGATTACCTCCGTGTTAAGGAGGATATTCTCTTGGATTTTCTTAAAGTCATCAGTCATCATGGAGCTCGGCTAGCCACACCCATTCGCACAATTCAGAAGATGTACGGTGATCGTGATTTAGAAACTGATCCATTTGAAGATGCCATTTTCACTCGTTCCAACACAAAGGGAAACCGCTCTATGCCATTCATAGATCCACCCTATAAAGTTAAGCCTTCAACTCAATCAATTATTGTAAACGGTGAAAAAGATGCCAAGATTCGTGAAACTTTATCTGGTTTCAAAGACGAAGGTGAAAAAATTATCGCGACATGGACCCCTTCTTCCAGTGCAAAGCCCCAGGATAAATTCAAGTCATCATCTCAAGCCAAGACCCAGAGTGTGGGTTCTGATAACTCGGTCCAAAAGGCCACTAAATCGGGAACAACACCCCAAATTTTGTCATCATCCAATGAAACTTCACCGTCAAAGAAAGATGAAGAAAAATGA 1767 0.4041 MAYSGSIRLFHDIKQYSSNNGSCSFCHKLNSGNRLCFVAFNHPWHSLRMDSSALIFSRLHVQIKPVPSRCNVLLCRSALVPAGGCEAPLMKVATVSLSRSYTAISGAPIVLQLIPALGIIGFAAFGLEPLMRLCRALFLQEWNDKSWKKSNSRYIMTSYFQPLLLWTGVMLICRCLDPLVLQSETRPVIKQRLLSFVRSFSTVFTLAYCSSSFVRQAQNFYKETNDTNNERKMSIDLIGKAVYTAIWVAAVSLFMELLGLSTQKWLTAGGMGTILLSLAGREIFTNFLSSMMIHATRPFVVNERIKTKIKGYEVSGRVEHVGWWSPTIVRGADCEAVHIPNHKLSVNVVRNLSKKTHWRIKTHLAISHLDINKINIIIADMRKVLAKNPLVEQKKLHRRVFLEDVNPENQALMILVSCFVKTSHSEDYLRVKEDILLDFLKVISHHGARLATPIRTIQKMYGDRDLETDPFEDAIFTRSNTKGNRSMPFIDPPYKVKPSTQSIIVNGEKDAKIRETLSGFKDEGEKIIATWTPSSSAKPQDKFKSSSQAKTQSVGSDNSVQKATKSGTTPQILSSSNETSPSKKDEEK 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g04883 588 Gene3D - 191 297 - -
Trre6g04883 588 MobiDBLite consensus disorder prediction 530 588 - -
Trre6g04883 588 MobiDBLite consensus disorder prediction 530 579 - -
Trre6g04883 588 Gene3D - 298 351 IPR023408 -
Trre6g04883 588 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 1 580 IPR045042 -
Trre6g04883 588 Pfam Mechanosensitive ion channel 240 449 IPR006685 GO:0016020|GO:0055085
Trre6g04883 588 SUPERFAMILY Sm-like ribonucleoproteins 283 353 IPR010920 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g04883 Trre-Chr6 51653624 51659093 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g04883 1 502 Mechanosensitive Ion Channel Family AT1G58200 56.461 0.0 586
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g04883 K22047 - mtr:11434686 1002.28