Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre6g04880 | ATGATATCCTGCTATGTGAAAACTTCACATTTTGAGGAGTACCTCTATGTTAAGGAGGCAATCCTTTTGGATTTTCTCAAATTTATCAGTCATCATCGAGCCCCGTTAACAACTCCCATCTGGCTAGTTGATGAACCTGTGAACATGGATTCTGATAGTTCAGTTGAGAAGACCTCAAAAACTATGCAGCCTAAAAAAGAAAGTTCAGGGAATGTAGGAAAGGGAAGTACAACTTCTGCATCTAAAAATCTTGCTCAAAGTGCTGTATCTGAAACTTTGCCTGTTACTTCCCATGAGTCTGGAAGGGGAGAGACTACTTCTGCTACTTTGTCATAG | 336 | 0.4018 | MISCYVKTSHFEEYLYVKEAILLDFLKFISHHRAPLTTPIWLVDEPVNMDSDSSVEKTSKTMQPKKESSGNVGKGSTTSASKNLAQSAVSETLPVTSHESGRGETTSATLS | 111 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre6g04880 | 111 | PANTHER | OW CONDUCTANCE MECHANOSENSITIVE CHANNEL | 1 | 78 | IPR045042 | - | |
Trre6g04880 | 111 | MobiDBLite | consensus disorder prediction | 52 | 111 | - | - | |
Trre6g04880 | 111 | MobiDBLite | consensus disorder prediction | 50 | 111 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre6g04880 | Trre-Chr6 | 51645198 | 51646342 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre6g04880 | 1 | 58 | Mechanosensitive Ion Channel Family | AT5G10490 | 60.345 | 5.18e-16 | 70.5 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre6g04880 | K22047 | - | han:110891045 | 71.2478 |