Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g04799 ATGCCGATCATCAAAAGCATTACAAAAGAATATATTGGCAAGCCAATAAGATGCAAAGCTGCAATATGCAGAAAATCAGGTGAACCTCTTGTTATAGAAGAAGTTGAATTAGACCCACCAAAATCATGGGAAGTACGGATCAAAATTTTATGCACATCTCTTTGCCATTCTGATCTTACCTATTGGAAAATGGATCCTTCTACACCTGCCGCTGTGTTTCCTAGAATTTTAGGACACGAAGCCGTGGGTGTTGTGGAAAGTGTAGGGGAACACGTAGAAGAAGTGAAAGAAGGCGAGTTAGTGGTACCGGTGTTTCTCCCAAACTGTGGAGAATGCAGAGACTGCAAAAGCAGAAAGAGCAACAATTGCAGCAAGTTTGGGAGCAAATTCCAGTATGGCATGCCAAGAGATGGAACAAGCAGGTTTAGGGACATCAATGGAGAAGTGGTGCACCATTTATTTGGTGTGAGCAGTTTTTCTGAGTATACTGTGGTGGATGTAACACATTTGGTTAAAATTGTACAAGATTTTCCTCTTGATAAGGCTTGCTTGCTCAGTTGCGGTGTTTCCACAGGGGTAGGGGCCGCGTGGAAGGTGGCTGATGTAGAAAAAGGGTCCACAGTGGCTATTTTTGGGCTTGGTGCTGTAGGCCTAGCTGTTGCTCTAGGAGCAAAACAAAGAGGAGCATCGATGATTATAGATTTATAG 708 0.4336 MPIIKSITKEYIGKPIRCKAAICRKSGEPLVIEEVELDPPKSWEVRIKILCTSLCHSDLTYWKMDPSTPAAVFPRILGHEAVGVVESVGEHVEEVKEGELVVPVFLPNCGECRDCKSRKSNNCSKFGSKFQYGMPRDGTSRFRDINGEVVHHLFGVSSFSEYTVVDVTHLVKIVQDFPLDKACLLSCGVSTGVGAAWKVADVEKGSTVAIFGLGAVGLAVALGAKQRGASMIIDL 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g04799 235 Gene3D - 21 191 - -
Trre6g04799 235 Gene3D - 192 233 - -
Trre6g04799 235 PANTHER ALCOHOL DEHYDROGENASE 13 233 - -
Trre6g04799 235 Pfam Alcohol dehydrogenase GroES-like domain 44 173 IPR013154 -
Trre6g04799 235 SUPERFAMILY GroES-like 12 211 IPR011032 -
Trre6g04799 235 FunFam alcohol dehydrogenase 1-like isoform X1 26 191 - -
Trre6g04799 235 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 78 92 IPR002328 GO:0008270|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g04799 Trre-Chr6 50872369 50877414 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g04799 44 187 Monolignol Biosynthesis Gene Families AT4G37970 30.345 2.74e-13 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g04799 K00121 - mnt:21395940 315.849