Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g04775 ATGTTTGGAAGCATATCACCAGTTATAAAGAGCAGCATGAGTTACAATCAGAAACAAATTGCTTTCTTAAGTGTTGCTAAAGATTTAGGTAGTAACGTTGGACTTCTTGCTGGTTTTATCAGCAAGTTTTGGCCTGTTTGGGGAGTTATGCTTGTTGGTGTTTTTCATAATGTTTTTGGTTATGGTCTTGTTTGGCTTGTTGTTACTCACAGGATTCCTTCTTTGCCTTTATGGATGCTATGTTTTTTCATCCTTGTGGGAGCAAATGGAACAACATACTTCAACACAGCAGCATTGGTTTCAAGCCTACGAAGTTTCCCAGAAAACCGAGGACCCGTGGTAGGAATATTGAAGGGATTTGTTGGCTTAAGCGCCGCAATATGGACTCAAATTATAGCCATGATCAATCTACCTGATCAAGCTTCTTTGATTTTCATCATAGGCGTTGGACCCGCAATGGTTTCTTTAACCTTCATGTTCATCATAAGACCAGTTCATAGTTTGAATAAATCTAGACCCTCTGATGAATCAGGATTCATGTTTATTTATAGCATTTGTCTTCTCTTAGCTGCTTATCTTGTAGGAGTTTTGTTGCTAGAGAACATGTTTGATTTGGATCAAAACATTATAACTTTATTTGCTGTCATTTTGATTTTTCTTATATTGCTTCCAATTATAGTTCCTATTCTATTGGTTTTCTTTTCTGAACCGAAAAACATCGATGAGGAACAACTTCTTCAACCTTCAATGGTTATGCAGAATGAAACTGGTACTGATAATGACATTTCTAAACATGTTGTTTTTGACGATGAGAACAAGTCTTCAAATCTAGAAGTGCCTCCAAGGGATATGGTTTTGTTTCATGCTAGAGTTATCGAAGCAGTAACTTCAGCTGTGAAGAAAATCAAGCAAAAAAATGGGCCTCAAAGAGGAGAGGATTTCACCTTAACACAAGCACTTGTAGAGGCTGATTTTTGTCTCATGTTCTTGTCTATCATCTTGGGTTGCGGATCGGGTTTGACAATTATAAACAACATGGGTCAGATTTGTCAATCTTTGGGAGACAACAACGTTAATGTTTATGTTTCGGTTATTAGCATATCCAATTTCCTTGGTCGTGTTGGTGGAGGCTACTTCTCCGAGGTTATAGTAAGAAGTTTAGGATACCCCAGACCTGTGGCATTGGCAGTGATTCAGGCAGTGATGTCTTTGGGACTTTGCTATTATAGCATAGGCTTGGTTGGACATATTTATGTGATAGCAATAACAATGGGTTTTGGGTATGGTGCACATTGGTCAATTGCATTATCAGCAACTTCAGAAATATTTGGCTTAAAGAATTTTGGGACTATGTACAATTTTCTTACAACTGCTAACCCAATTGGATCTTTGTTTGTATCTGGATTAGCGAGCACGTTATACGACTATTATGCAGAGCAGCAAGCAAAACATAGAAATGATAATGAATTGCTTCTTTGTGAGGGAAACATTTGTTATTCCTTAACATGTGGAATTTTAGCAGTAGTTTGCTTGTTTGCAGCTGGTTTGAGCTTGATCATAGTTCAAAGGACTAAGATGTTTTATTCACAACTTTATGGAAAGTCTCTATCTTGA 1614 0.3736 MFGSISPVIKSSMSYNQKQIAFLSVAKDLGSNVGLLAGFISKFWPVWGVMLVGVFHNVFGYGLVWLVVTHRIPSLPLWMLCFFILVGANGTTYFNTAALVSSLRSFPENRGPVVGILKGFVGLSAAIWTQIIAMINLPDQASLIFIIGVGPAMVSLTFMFIIRPVHSLNKSRPSDESGFMFIYSICLLLAAYLVGVLLLENMFDLDQNIITLFAVILIFLILLPIIVPILLVFFSEPKNIDEEQLLQPSMVMQNETGTDNDISKHVVFDDENKSSNLEVPPRDMVLFHARVIEAVTSAVKKIKQKNGPQRGEDFTLTQALVEADFCLMFLSIILGCGSGLTIINNMGQICQSLGDNNVNVYVSVISISNFLGRVGGGYFSEVIVRSLGYPRPVALAVIQAVMSLGLCYYSIGLVGHIYVIAITMGFGYGAHWSIALSATSEIFGLKNFGTMYNFLTTANPIGSLFVSGLASTLYDYYAEQQAKHRNDNELLLCEGNICYSLTCGILAVVCLFAAGLSLIIVQRTKMFYSQLYGKSLS 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g04775 537 CDD MFS_Mch1p_like 1 514 - -
Trre6g04775 537 Gene3D MFS general substrate transporter like domains 316 527 IPR036259 -
Trre6g04775 537 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 2 529 - -
Trre6g04775 537 SUPERFAMILY MFS general substrate transporter 177 525 IPR036259 -
Trre6g04775 537 Pfam Nodulin-like 1 229 IPR010658 -
Trre6g04775 537 SUPERFAMILY MFS general substrate transporter 2 164 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g04775 Trre-Chr6 50644808 50647408 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g04775 1 535 Nodulin-like Gene Family AT5G14120 49.908 5.07e-177 509
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g04775 - - gmx:100784744 749.584