Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g04774 ATGGTTTCAATAAAAGAGAAATTGAAGAAATTTGTGGAACATAGATGGGTGGTGTTTGTGTGTTCAATGTGGGATTTATCATTTACAGGTACATCATACATGTTTGGAAGCATATCACCAGTTATAAAGAGCAGCATGAGTTACAATCAGAAACAAATTGCTTTCTTAAGTGTTGCTAAAGATTTAGGTAGTAACGTTGGACTTCTTGCTGGTTTTATCAGCAAGTTTTGGCCTGTTTGGGGAGTTATGCTTGTTGGTGTTTTTCATAATGTTTTTGGTTATGGTCTTGTTTGGCTTGTTGTTACTCACAGGATTCCTTCTTTGCCTTTATGGATGCTATGTTTTTTCATCCTTGTGGGAGCAAATGGAACAACATACTTCAACACAGCAGCATTGGTTTCAAGCCTACGAAGTTTCCCAGAAAACCGAGGACCCGTGGTAGGAATATTGAAGGGATTTGTTGGCTTAAGCGCCGCAATATGGACTCAAATTATAGCCATGATCAATCTACCTGATCAAGCTTCTTTGATTTTCATCATAGGCGTTGGACCCGCAATGGTTTCTTTAACCTTCATGTTCATCATAAGACCAGTTCATAGTTTGAATAAATCTAGACCCTCTGATGAATCAGGATTCATGTTTATTTATAGCATTTGTCTTCTCTTAGCTGCTTATCTTGTAGGAGTTTTGTTGCTAGAGAACATGTTTGATTTGGATCAAAACATTATAACTTTATTTGCTGTCATTTTGATTTTTCTTATATTGCTTCCAATTATAGTTCCTATTCTATTGGTTTTCTTTTCTGAACCGAAAAACATCGATGAGGAACAACTTCTTCAACCTTCAATGGTTATGCAGAATGAAACTGGTACTGATAATGACATTTCTAAACATGTTGTTTTTGACGATGAGAACAAGTCTTCAAATCTAGAAGTGCCTCCAAGGGATATGGTTTTGTTTCATGCTAGAGTTATCGAAGCAGTAACTTCAGCTGTGAAGAAAATCAAGCAAAAAAATGGGCCTCAAAGAGGAGAGGATTTCACCTTAACACAAGCACTTGTAGAGGCTGATTTTTGTCTCATGTTCTTGTCTATCATCTTGGGTTGCGGATCGGGTTTGACAATTATAAACAACATGGGTCAGATTTGTCAATCTTTGGGAGACAACAACGTTAATGTTTATGTTTCGGTTATTAGCATATCCAATTTCCTTGGTCGTGTTGGTGGAGGCTACTTCTCCGAGGTTATAGTAAGAAGTTTAGGATACCCCAGACCTGTGGCATTGGCAGTGATTCAGGCAGTGATGTCTTTGGGACTTTGCTATTATAGCATAGGCTTGGTTGGACATATTTATGTGATAGCAATAACAATGGGTTTTGGGTATGGTGCACATTGGTCAATTGCATTATCAGCAACTTCAGAAATATTTGGCTTAAAGAATTTTGGGACTATGTACAATTTTCTTACAACTGCTAACCCAATTGGATCTTTGTTTGTATCTGGATTAGCGAGCACGTTATACGACTATTATGCAGAGCAGCAAGCAAAACATAGAAATGATAATGAATTGCTTCTTTGTGAGGGAAACATTTGTTATTCCTTAACATGTGGAATTTTAGCAGTAGTTTGCTTGTTTGCAGCTGGTTTGAGCTTGATCATAGTTCAAAGGACTAAGATGTTTTATTCACAACTTTATGGAAAGTCTCTATCTTGA 1713 0.3713 MVSIKEKLKKFVEHRWVVFVCSMWDLSFTGTSYMFGSISPVIKSSMSYNQKQIAFLSVAKDLGSNVGLLAGFISKFWPVWGVMLVGVFHNVFGYGLVWLVVTHRIPSLPLWMLCFFILVGANGTTYFNTAALVSSLRSFPENRGPVVGILKGFVGLSAAIWTQIIAMINLPDQASLIFIIGVGPAMVSLTFMFIIRPVHSLNKSRPSDESGFMFIYSICLLLAAYLVGVLLLENMFDLDQNIITLFAVILIFLILLPIIVPILLVFFSEPKNIDEEQLLQPSMVMQNETGTDNDISKHVVFDDENKSSNLEVPPRDMVLFHARVIEAVTSAVKKIKQKNGPQRGEDFTLTQALVEADFCLMFLSIILGCGSGLTIINNMGQICQSLGDNNVNVYVSVISISNFLGRVGGGYFSEVIVRSLGYPRPVALAVIQAVMSLGLCYYSIGLVGHIYVIAITMGFGYGAHWSIALSATSEIFGLKNFGTMYNFLTTANPIGSLFVSGLASTLYDYYAEQQAKHRNDNELLLCEGNICYSLTCGILAVVCLFAAGLSLIIVQRTKMFYSQLYGKSLS 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g04774 570 SUPERFAMILY MFS general substrate transporter 210 558 IPR036259 -
Trre6g04774 570 Gene3D MFS general substrate transporter like domains 350 560 IPR036259 -
Trre6g04774 570 Pfam Nodulin-like 15 262 IPR010658 -
Trre6g04774 570 CDD MFS_Mch1p_like 14 547 - -
Trre6g04774 570 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 16 562 - -
Trre6g04774 570 SUPERFAMILY MFS general substrate transporter 14 197 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g04774 Trre-Chr6 50644709 50647408 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g04774 3 568 Nodulin-like Gene Family AT5G14120 49.477 0.0 539
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g04774 - - gmx:100784744 795.808