Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g04763 ATGGAAGAAGAAGAAGAATCAAACAGATTTGGGAAATTTTCTGTTGATTTAAAGCTTGGTCAAGTTGAGAATTCTGTCACTGATCAATCATCATCATCACCACTTCCTTTATGCAAAGATTCTGCTATTGTTGTTTCCAAAATGGCATCATCACCTTCTTGTTCTGGATCTTATAAGAGAGCTAGAACTATTAATAATACAACATTGTCAGTTTCTTGTCTTGTGGATGGGTGTAATTCTGATCTTAGTAATTGTAGAGATTATCATAGGCGTCATAAGGTTTGTGAACTTCATTCCAAAACTCCTGAGGTTACAATTGCTGGCCTTAAGCAAAGATTCTGCCAACAGTGTAGCAGGTTTCATTCACTGGACCAATTTGATGAAAGAAAAAGAAGCTGTAGGAAACGTTTAGATGGACACAACCGAAGGAGAAGAAAACCTCAACCAGAACCTATCACAAGACCTGCTGGTAGTTTTTTGTCCAATTACCAAGGCACCCAGTTGCTACCTTTTTCAAGTTCTACTACCATGGTGAATTCAGCTTGGAGTAGTAGCAGACTCATTACTTCCTGTGAAAGTAGTAGACTTCACATCAACAACAATCAACAACACCAACAACTACATGTGGTTGATAAACAAGACCATTTTCTTGGTTCTACAACACCAACCTATGGAGAAGGAAAACAACTTCAATTCTTACACAATGACAACAACAATAATCCTTCACTTCATAACCAAAACACACCTCTTCTCAGGACAAGTAGCAAAATGTTCTGTGATAGTTTAACAACTTCTTCAGTACATGAATCTCCTTGTGCTCTCTCTCTTCTGTCATCATCACAGACACATACATCTCATTCAATGGTGCAGCAGCCTCATTCAATGTCTCTTATGCAGCCACCCTTAGGATTGAGCCTGCATGGCAACAACAACAACAGCTTTGAGTCTATGGATAGAGTGTTGGTCCCAAATGGGAGTGAGAGTGATCATTGTTCCTCATTGTATAACATTGGTTCTGATGGATCACAAAGCAATGATGCACCTCAACTATTTCCCTATCAATGGGAATAG 1071 0.3894 MEEEEESNRFGKFSVDLKLGQVENSVTDQSSSSPLPLCKDSAIVVSKMASSPSCSGSYKRARTINNTTLSVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPEVTIAGLKQRFCQQCSRFHSLDQFDERKRSCRKRLDGHNRRRRKPQPEPITRPAGSFLSNYQGTQLLPFSSSTTMVNSAWSSSRLITSCESSRLHINNNQQHQQLHVVDKQDHFLGSTTPTYGEGKQLQFLHNDNNNNPSLHNQNTPLLRTSSKMFCDSLTTSSVHESPCALSLLSSSQTHTSHSMVQQPHSMSLMQPPLGLSLHGNNNNSFESMDRVLVPNGSESDHCSSLYNIGSDGSQSNDAPQLFPYQWE 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g04763 356 MobiDBLite consensus disorder prediction 134 159 - -
Trre6g04763 356 FunFam Squamosa promoter-binding-like protein 14 64 134 - -
Trre6g04763 356 Gene3D - 64 134 IPR036893 GO:0003677|GO:0005634
Trre6g04763 356 ProSiteProfiles Zinc finger SBP-type profile. 70 147 IPR004333 GO:0003677
Trre6g04763 356 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 36 332 IPR044817 GO:0003677
Trre6g04763 356 Pfam SBP domain 73 146 IPR004333 GO:0003677
Trre6g04763 356 SUPERFAMILY SBT domain 71 152 IPR036893 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g04763 Trre-Chr6 50571810 50575169 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g04763 13 356 SBP-box Gene Family AT5G50670 40.220 1.83e-61 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Trre6g04763 SBP 3.7e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g04763 - - gmx:100787407 366.311