Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g04719 ATGTTTGAAACAAACTTTTTTCCTTACCATTTTCATGTGAAACCCATCCGCCAGAATCTTCATGCTCCTGTCACTGAAGAAATGAAACAGAAGTTCGCTTCTGCTGTCTATCTTCAAGTCAGTACAATTAGTCAAGCCTTAATCTTTGTGACACGGTCCAGGGGTTGGTCCTACACAGAAAGACCTGGTCTTTTGCTTGTTTTTGCCTTTATTATTGCTCAGCTGGTTGCAACTGCTATATCAGCATTTGCTAATTGGGAAATTGCTGGAATCAGAAGCATAGGTATGGGTTGGGCAGGAGTCATTTGGTTGTTCAACATTGTAACTTATGTTTTTCTTGATCCTTTAAAGTTTGCTGTTGCTTATCAACAAAGCGGAAGGGCTTGGAATCTGGTGACTGCATTCACCAACAAAAATGATTTTGGTAAGGAATCTCGTGAAGCTGCATGGGCTGCTGAGCAGAGAACCTTGCATGGTCTTCGCTCTTTTGAGTCAAAAGGGTTTGCAGAGAAGCACAACAACCATAGGGAAATAAATACAATGGCAGACGAGGCTAAGAGGCGAGCAGAGTTAGCAAGGTTGAGAGAGCTTCACACACTGAAAGGAAGAGTGGAATCGTTTGCCAGGCTAAGGGGTTTGGACGTTGAAACCATGAATGGGCACTACACTGTCTAA 675 0.4296 MFETNFFPYHFHVKPIRQNLHAPVTEEMKQKFASAVYLQVSTISQALIFVTRSRGWSYTERPGLLLVFAFIIAQLVATAISAFANWEIAGIRSIGMGWAGVIWLFNIVTYVFLDPLKFAVAYQQSGRAWNLVTAFTNKNDFGKESREAAWAAEQRTLHGLRSFESKGFAEKHNNHREINTMADEAKRRAELARLRELHTLKGRVESFARLRGLDVETMNGHYTV 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g04719 224 PANTHER CALCIUM-TRANSPORTING ATPASE 11 156 - -
Trre6g04719 224 SUPERFAMILY Calcium ATPase, transmembrane domain M 29 120 IPR023298 -
Trre6g04719 224 Gene3D - 173 224 - -
Trre6g04719 224 Gene3D - 1 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g04719 Trre-Chr6 50106340 50108486 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g04719 2 224 Primary Pumps ATPases AT5G62670 59.471 1.51e-83 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g04719 K01535 - gmx:100794938 325.865