Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g04705 ATGTCCAACAATATGAATCTTAATACACTTTATAATGTTTGCATTACTGTCCCACCCAATATTCTATCAGATGGCATATGGGGTGTACATAAATCCCATAAGACTCCATTCAAGTGTTCTTTACCAATGTTCCTTCTTCAAGTTGTTCTAATTTATACCACAACAAGAATTTTAAATTTTCCTTTCAATAAATTGGGTTTACCCATCCTCTTTTCACAAATGATGGCAGGGCTAATTTTAGGACCAATGGTGCCGGTATTCAAGGACTACAAGAGGAAGTTGTTTCCTTATGGAAGTCAAGATACACTTGCATCAATAACAGCACTTGGTTATGTGTTTTTTCTATTTGAAACTGGTATAAAAATGGATTTTCACACGATCATGAAAACAGGAAAAAAAGCATGGGTGATTACGTTTTGCGGGTTAGTAACCCCTATTATAACTGGTTTTGTTACTCGAAATGTAAGGGCTATGAATGCTTTTAATAACAGTCCCCTTGAAGCAAATATAGTAATGATAGGACACAATACAACTTCATTCGCCGTAATTGTTGCTCTCTTAAATGACCTTAAGCTTCTAAACTCCGAACTTGGACGATTAGCATTATCTGTTTCCTTGATTGGTGACCTATTGAGTAACATTGTTGTAACTTTGTCCTCAACTTTGGTGAGTTTGAATAGTCATATTTCATTTGGCATGAGATTAGGATCTTTAATCGGCATAGCTATCTTCGTTTTGTTCATCTATCGTCCCGCAATGCTTTGGATTGTTCAACACACTCCTGAAGGAAAAGAAGTTGAGGATATTTACGTCAACATTGTTATCGGGATTTTGTTTGGTTTGTGTTGGTTTTCAGGATACCTAGAAAGAGGACCTGTCTTTTTACCTTTTATTTTCGGATTGGCTACACCCGAAGGACCTCCATTAGGATCTACATTGATTAAAAGAATTCATTTGTTAGGCATAAAATTGTTCTTGCCAATTTTTATGGCTACTACTACAATGAAAGTAGAATATGGCTTCTGGAATACATCATCAGCATCAACATTTGATGTTTTTTTGTATGTTTTATTTATCGGTTATTTCGCCAAAATGGTAGCATGTTTTATATGTTCACTCTCTTTCAACATGCCTCCAAAAGATGCTATCTCTCTTTCCTTGCTTTTGAACTGCAAAGGCGTTGTCGAAGTAACCATGTACGCTACCGCATTGGATAGAAATGATATCCTTTCACAAACATATTGTGTGATTATACTGATAATCATGGTTTCAATTTGCATAACTCACTTGTTGGTAAAACGTTTGTATGATCCTTCAAGAAAATATGCTGGCTACCAAAAGAGGAACTTGTTCAATTTGAAAAACAACTCAGAATTGAAGATACTAGTTGTCATTCATAAACAACACCATGTAACTCCTATCACTGGAGTAATCGATTTATGTCACCCTATAGCCGAGAATCCTATCATCGTAGACGCGTTGCATTTAATCGAGTTAGCTGGCAGATCCTCACCTATTTTCATTTCTCACAAGAAGAAGAAAGTTGTTGCTTTAAACTTGCATGATTCTTATTCTGATAATGTTGTTCTTAATCTCAAAATATATGAACATGATAAACAAGGTGGAGCAATAATAAACCCTTACACAGCTATATCTCCACTTAATTTAATGCATGAAGATGTTTGTCACTTAGCATTTGACAAACTTTCATCAATTATAATCCTTCCTTTTCATAAAAAATGGTTTAGTGATGGTAAGCTTGAATATGATGACAAGAACATTAGGGCTTTAAACTGCTCAGTCTTGGAAAAATCTCCATGCTCAGTTGGAATCCTAGTGACTCGCGGTATTCGTCAAACGGATTCATTATTTCGATTAGCTTTGGTATTTTTAGGTGGAAAAGATGATAGAGAGGCATTATGTTTGGCGAATCGGGCAGCACGAGACCCTAGCGTCGAGCTTGTGATATATCACATTGTAAACAAGAAGAGAACTTTACAGGACATGGAAAATATGGAGACAAGGTTTGATCTAGCAATGTTAAAAGATGGTAAAATAGAACACTCTAGATTGGGAAATGTAGCATATAGAGAAATTGAAGTGGAGGGTGGATCACAAACAATTGATGTTCTTAGACAAATGGTACAAGAACATGATTTTATTATAGTTGGGAGAAGAAATGGAATCAAATCTCCACAGACATCTGGGCTTCAAGAATGGAGTGAGTTTCCTGAGTTAGGTCCTGTTGGAGATTTTTTGGCTTCCTCTGATCTTGATTGCACAGCATCTATTTTAGTAGTTCAACAACAAATATGCATGTAG 2322 0.3583 MSNNMNLNTLYNVCITVPPNILSDGIWGVHKSHKTPFKCSLPMFLLQVVLIYTTTRILNFPFNKLGLPILFSQMMAGLILGPMVPVFKDYKRKLFPYGSQDTLASITALGYVFFLFETGIKMDFHTIMKTGKKAWVITFCGLVTPIITGFVTRNVRAMNAFNNSPLEANIVMIGHNTTSFAVIVALLNDLKLLNSELGRLALSVSLIGDLLSNIVVTLSSTLVSLNSHISFGMRLGSLIGIAIFVLFIYRPAMLWIVQHTPEGKEVEDIYVNIVIGILFGLCWFSGYLERGPVFLPFIFGLATPEGPPLGSTLIKRIHLLGIKLFLPIFMATTTMKVEYGFWNTSSASTFDVFLYVLFIGYFAKMVACFICSLSFNMPPKDAISLSLLLNCKGVVEVTMYATALDRNDILSQTYCVIILIIMVSICITHLLVKRLYDPSRKYAGYQKRNLFNLKNNSELKILVVIHKQHHVTPITGVIDLCHPIAENPIIVDALHLIELAGRSSPIFISHKKKKVVALNLHDSYSDNVVLNLKIYEHDKQGGAIINPYTAISPLNLMHEDVCHLAFDKLSSIIILPFHKKWFSDGKLEYDDKNIRALNCSVLEKSPCSVGILVTRGIRQTDSLFRLALVFLGGKDDREALCLANRAARDPSVELVIYHIVNKKRTLQDMENMETRFDLAMLKDGKIEHSRLGNVAYREIEVEGGSQTIDVLRQMVQEHDFIIVGRRNGIKSPQTSGLQEWSEFPELGPVGDFLASSDLDCTASILVVQQQICM 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g04705 773 Gene3D - 42 443 IPR038770 -
Trre6g04705 773 PANTHER CATION/H + ANTIPORTER 26 770 - -
Trre6g04705 773 Pfam Sodium/hydrogen exchanger family 48 431 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g04705 Trre-Chr6 49951214 49954069 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g04705 13 773 Antiporter Super Family AT5G22900 33.293 1.13e-140 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g04705 K26731 - gmx:100784321 769.229