Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g04660 ATGCATAGTACCTTTGTACCCAAAACAACACTCAACCAAAACAACACTTCATTACTCTTCCAAAGTAGCAGAAAGCTGAAGCTCCAACAAGAAGTTTTAACACATCATTGTCAGATCTTAAACAAATGTGTCCTTCCTTCAATCTTCAAACGCGCTCAGAATCGCTTCTCCATCGTCGGCTACGTTTCAAAATCGGACTATAATTTCAAAATGTCTACATATAGTGAAGCAAAGGTGCATCTTGACAGTGATACAAAAGAAGTAAAAATTAATAATGGTAATGGTGCTGACACCAATGAAGATTCAGAAAATATAGAATTCAATAGCGGCAATGGTGTTTGTTCTGATAGAGATACACAAGGTGTGGAATTCAACATTGGTAATGGCGTGTGCAGTCAACAAGGGAAAGAGAACTCCAATGATTACAAATGTATAAGTGATTTGATAGATGATTATATAAGGGGTATGGAATTCAGCACAGAGGGAGAAGCTATAACATTTTATACTTTGTATGCACATCTCCATGGGTTTGCTATAAGAAAAGATGAAGTGAAACGTGATCGTGAAAATAACATTGTTCTGCGTCAATTACTTTGCAATAAAGAGGGTATTAGTGACGGTCATTTGAGGCCAACTATGCGAAACTTCGAATAG 654 0.3685 MHSTFVPKTTLNQNNTSLLFQSSRKLKLQQEVLTHHCQILNKCVLPSIFKRAQNRFSIVGYVSKSDYNFKMSTYSEAKVHLDSDTKEVKINNGNGADTNEDSENIEFNSGNGVCSDRDTQGVEFNIGNGVCSQQGKENSNDYKCISDLIDDYIRGMEFSTEGEAITFYTLYAHLHGFAIRKDEVKRDRENNIVLRQLLCNKEGISDGHLRPTMRNFE 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g04660 217 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 78 208 - -
Trre6g04660 217 Pfam FAR1 DNA-binding domain 166 206 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g04660 Trre-Chr6 49607961 49614168 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Trre6g04660 FAR1 1.6e-06 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g04660 - K17604 tpra:123915422 152.14