Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g04626 ATGAATAAGTGGGGTGTTAATCATCAACAGGCATTCATTGGTTGGCATGGGGAAGGTGGAAGTAATTTTACTGCTGTTACTAACGAGGAAGAGGAATCAGACAATGAGGAAGAGAAAGAACAAGAAATAACTATTAAAAATGAACCTATCTTTTTTCCAGATATTAAGAAAAGGAAGCGACTCAGCCTTAGTCAGCTTAGAGAGGGGAAAGAGGAGTCGTCTGGGAAGCTTAGTCAGCTGAGTGAAGTGAAAGTGGAGTCTTGTGAGAAGTTTATTCAGCTTAGAGAGGTGAAAGAGGAGTATTGTGGGAAGGAAAGCGGTAGCAAGAAAACGAGAAAGAAGCTTGAGGCTAAGGACAGATGGTCAGGCGAGAGGTACAAGTTGGCTGAGCAAACCATGTGGGAAGTGTTGAAGGCAGAGGGTGCGACTTTTGAAAATCCGATAACCCGACCTGCACTAAGATCGGCTGCCCGTAAATTCATTGGCGATACTGGACTTTTAGACCACTTACTGAAGCACATTAATGGTAAAGTGGCCCCTGGAGGCACTGATCGGTTCCGAAGATGGTACAACACCGGTGGAGTCATGGAGTATTGGTTGGAGAGTGCTGACTTGGATGACGTCCGCCAGGAGGCTGGGGTGCATGACTGCTACTGGATACCACCATCCACTGATAAGGCAATCCGTGCCCCTTGTCAGGATACTGATTCTTCGGGTGAATTGGAATTGCTTAAAAAAGAAATGGCTCAAATGAAGAAAGATATGCAGGAGCTCGTTGCCAAGAAGGAAAAGAAAATTGAAAGTAACGTGATTGAGAAGACTTGCAAGGAATTTATGAAGTGGAAAGCTACAACTGACCATCGCCTTACTGAAATCATTGCTTCTGTGAAGAATTTGCAGGGCAATTATGGTGAATTAATGAATTGGAAAACTGAAGTGGAGAATCATCTTATGGATATAACAAATAAATTGAATGATCTTCAAGCAGCAAAAGAAGGCACCACTTTTAGTCCTCCTTCAGACAAATGGAAAGATTGGTTAGAAGCCCCTGATCCTAACAATTTTCAGGAGGATACATTGGCAACTTGGATCGGGAGTTCAAAGCTACTTAATGTTCCACAAGAGTGTTTGCCTGAATATCCGTGCGCAGGCATGCCAACTCAGCCACTCAATGAAGAACCCACTAACAAGAAGAGTGATGCTGAAGAGCTGATGCCCACAATGCAAGAGGATCAAAATAATGTCACCCCAGATTCTTCTACAACTGTTAATTCAAAGGCAGACATTGACAACTCATTGATAATGTTTCAGGAGATGTTTATGGATTTATTCAAATGGAAAGAAAAAATGGAGCAGCAGCTGCTGGATGTATCAAACACTGTATATGGCATGCTAGCAATGAAGTAG 1407 0.4286 MNKWGVNHQQAFIGWHGEGGSNFTAVTNEEEESDNEEEKEQEITIKNEPIFFPDIKKRKRLSLSQLREGKEESSGKLSQLSEVKVESCEKFIQLREVKEEYCGKESGSKKTRKKLEAKDRWSGERYKLAEQTMWEVLKAEGATFENPITRPALRSAARKFIGDTGLLDHLLKHINGKVAPGGTDRFRRWYNTGGVMEYWLESADLDDVRQEAGVHDCYWIPPSTDKAIRAPCQDTDSSGELELLKKEMAQMKKDMQELVAKKEKKIESNVIEKTCKEFMKWKATTDHRLTEIIASVKNLQGNYGELMNWKTEVENHLMDITNKLNDLQAAKEGTTFSPPSDKWKDWLEAPDPNNFQEDTLATWIGSSKLLNVPQECLPEYPCAGMPTQPLNEEPTNKKSDAEELMPTMQEDQNNVTPDSSTTVNSKADIDNSLIMFQEMFMDLFKWKEKMEQQLLDVSNTVYGMLAMK 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g04626 468 Coils Coil 26 48 - -
Trre6g04626 468 MobiDBLite consensus disorder prediction 17 45 - -
Trre6g04626 468 PANTHER PROTEIN DYAD 1 466 IPR044221 GO:0007131|GO:0051177|GO:0051321
Trre6g04626 468 Coils Coil 310 330 - -
Trre6g04626 468 Coils Coil 241 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g04626 Trre-Chr6 49309198 49311223 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g04626 120 201 PHD Transcription Factor Family AT5G22260 40.964 1.55e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g04626 - - gmx:100806484 596.275