Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g04615 ATGATGAACAAGGCACACTTTGGTCTTTTCTTCACTTTGTTTATTCTGCTTGCTTCTCAGTTGGCGGTACAAACTGAGGGAAGGCGTCATGGGTCAAGGAGTCGCCGGTTTGAAGGAGTGTGTTTGAGCAATCACAGCTGCACTTCAGTTTGTCGTGATGAAGGCTTTGAATGTGGCGAATGCAAGAGATTTCGTAAAGGTTGCTTCTGCTACAACCATTGTTAA 225 0.4489 MMNKAHFGLFFTLFILLASQLAVQTEGRRHGSRSRRFEGVCLSNHSCTSVCRDEGFECGECKRFRKGCFCYNHC 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g04615 74 SUPERFAMILY Scorpion toxin-like 32 74 IPR036574 -
Trre6g04615 74 PANTHER DEFENSIN-LIKE PROTEIN 1 4 72 - -
Trre6g04615 74 Pfam Gamma-thionin family 32 74 - -
Trre6g04615 74 CDD Knot1 39 71 IPR003614 GO:0006952
Trre6g04615 74 Gene3D - 30 74 IPR036574 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g04615 Trre-Chr6 49178271 49180113 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g04615 2 74 Plant Defensins Gene Families AT5G63660 42.466 1.83e-14 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g04615 - K19330 qsu:112007077 80.8777