Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g04512 ATGGGAAATAAAGGAAACAAAACAGATGAATATATAGTGTGTTATGCACCAACCATGATAACAACAAATGGAATATGGGAAGGAGATAATCCTTTGGATTATTCTCTCCCACTTTTCATCTTGCAATTAACCTTAGTTGTTGCAGCCACTCGAATATTCGTCTTTCTTCTCAAGCCCTTTCGCCAGCCACGCGTCATAGCCGAAATTCTGGGAGGAGTAATGTTAGGTCCTTCGGTACTCGGAAAAAACAAAACATTCGCCAATGCAGTGTTTCCTCTAAGAAGTGTCATGGTGATTGAAACAATGGCAAATGTTGGTCTTCTTTATTTTCTTTTCTTGGTTGGTGTGGAGATGGACATAACCATTTTGCGCAGCGTAGGTAAAAAGGCAGTAACTGCAGCAATTGCCGGCATGATTTTGCCTTTCATCCTTGGTGGTGCTTGTACCGTCCTTTTAAATAAACAAAACAACAGTGAGATGAACCAAGGAACTTATATTCTGTTCATCGGTGTCGCTCTTTCTGTCACTGCATTTCCTGTTCTAGCTAGGATCCTTGCTGAGCTAAAACTTATTAACACGGATTTAGGAAGGCTTGCTCTTTCATCTGCACTCATTAATGATGTCTGTGCTTGGATTCTCTTGGCTTTAGCAATTGCAATGGCTGAGAATGAAACAACTTCTTTTGCTTCCCTTTGGGTTTTATTGTCCGGCGCAGCGTTTGTCGCCTTTTGTGTTTATGCCGTTAGACCAGCAGCCTCGTGGATAGTTAAGAAAACACCCGAAGGAGAATCTTTTAGTGAATTCTATATATCTCTTATATTAGCCGGTGTCATGGTCTCCGGTTTCATCACAGATGCTATTGGAACTCATTCTGTTTTCGGAGCTTTTGTGTTTGGTTTGGCGATCCCAAATGGACCACTCGGAGTTACTCTTGTGGAAAAGCTTGAGGACTTTGTTTCAGGACTTTTGCTCCCTCTATTTTTCGCCATTAGCGGACTAAAAACCAATATAGGACTCGTTCAAGGTTCTCACACTTGGACTATTATTATTGTTGTCATCTTTCTTGCTTGCATTGGTAAAATTGTTGGAACTCTAGCTGTTGCACTCTTTTATCAAATGCCGATTCGCGAAGGCGCTACACTCGGTTTACTCATGAACACAAAAGGCCTTGTTGAAATGATTGTGCTCAATGTTGGAAAGGACCAAAAGATTTTTGATGAAGAATCATTTGCAGTGATGGTGATTATAACATTATTAATGACAGGAATAATTGTACCTTTTGTATCAATAATTTATAAACCATCAAGGAGAAACATATATTACAAAAGAAGAACAGTTCAGATATTAAAACCAGATGCAGAATTTAGAGTACTAGTTTGTGTACATAGTCCTCGAAACGTGCCAACAATGATCAACCTCCTTGAAGCCTCGAATCCAACAAAGGGGTCACCAATATGCGTCTATGTGCTCCATTTGGTCGAACTTAGCGGTCGAACATCAGCAATGCTCATTGTTCACAACACAAATAAACAAGAAAATGCGGCACTTAACCGAACCGAAGCACAATCCGACCACATCATCAACGCATTTAAAAACTACGAACAACACACATCGTTTGTCTCGGTTCACCCCTTAACAGCAATCTCCCCTTACCCAACAATGCACGAAGATATATGCAATTTGGCAGAAGACAAACGTGTATCACTAATAATCGTTCCGTTTCATAAACAACAAACAGTTGATGGTGGAATGGAAACAACAAACATGGCGTTTCGAACAATCAACCAAAATGTACTAGCAAATGCACCTTGCTCGGTCGGAATTCTAGTGGATAGAGGCTTAAGCGGTTCAAATCGGTTAGCCTCAAATCAAACATCACATCACGTAGCCGTTATATTTTTCGGTGGTCCGGACGACAGAGAAGCGTTATGTTACGGATGGAGAATGTTGGAACATACAGGTATAAGCCTAACGTTAATGCGATTCGTCCCGGGAGAACAAGTAAGCAGACCGGTTCAACAACATCAACAACAACAATATGGATCCAATTCAGATGAACCAAGTGTGGTAACAGTTGAAACAGAAAATGATATAGAAAAAATACTTGATGATAAACTAATACATGAGTTTAGGATAAGATATGGGAATGATAGTTCAGTTGATTATTTAGAAAAAGTAGTTAACAATGGAGAAGAAACAGTTGCAGCAATAAGAACAATAGATGATATTCATGATCTTTTCATTGTTGGAAGAGGTCAAGGAATGATATCACCATTGACAGCAGGACTTACTGATTGGAGTGAGTGTCCTGAGATGGGTGCAATTGGTGATTTGTTAGCTTCTTCAGATTTTGCAGCAACTGCTTCAATTTTGGTTGTTCAACAATATATTGGAACAGGTTCAAATGGTGATGGATTAGATACACCAGATGGTCATGGTGGTGATGAATATAATAATAGTATTGACATAAATCATCATTCTACAACACCAAGAGGACATACTGTTTTTAATACAGACAGAATCAATCATCATAATTTGTAA 2541 0.3932 MGNKGNKTDEYIVCYAPTMITTNGIWEGDNPLDYSLPLFILQLTLVVAATRIFVFLLKPFRQPRVIAEILGGVMLGPSVLGKNKTFANAVFPLRSVMVIETMANVGLLYFLFLVGVEMDITILRSVGKKAVTAAIAGMILPFILGGACTVLLNKQNNSEMNQGTYILFIGVALSVTAFPVLARILAELKLINTDLGRLALSSALINDVCAWILLALAIAMAENETTSFASLWVLLSGAAFVAFCVYAVRPAASWIVKKTPEGESFSEFYISLILAGVMVSGFITDAIGTHSVFGAFVFGLAIPNGPLGVTLVEKLEDFVSGLLLPLFFAISGLKTNIGLVQGSHTWTIIIVVIFLACIGKIVGTLAVALFYQMPIREGATLGLLMNTKGLVEMIVLNVGKDQKIFDEESFAVMVIITLLMTGIIVPFVSIIYKPSRRNIYYKRRTVQILKPDAEFRVLVCVHSPRNVPTMINLLEASNPTKGSPICVYVLHLVELSGRTSAMLIVHNTNKQENAALNRTEAQSDHIINAFKNYEQHTSFVSVHPLTAISPYPTMHEDICNLAEDKRVSLIIVPFHKQQTVDGGMETTNMAFRTINQNVLANAPCSVGILVDRGLSGSNRLASNQTSHHVAVIFFGGPDDREALCYGWRMLEHTGISLTLMRFVPGEQVSRPVQQHQQQQYGSNSDEPSVVTVETENDIEKILDDKLIHEFRIRYGNDSSVDYLEKVVNNGEETVAAIRTIDDIHDLFIVGRGQGMISPLTAGLTDWSECPEMGAIGDLLASSDFAATASILVVQQYIGTGSNGDGLDTPDGHGGDEYNNSIDINHHSTTPRGHTVFNTDRINHHNL 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g04512 846 Gene3D - 38 439 IPR038770 -
Trre6g04512 846 MobiDBLite consensus disorder prediction 823 846 - -
Trre6g04512 846 FunFam Cation/H(+) antiporter 15 38 439 - -
Trre6g04512 846 PANTHER CATION/H + ANTIPORTER 13 797 - -
Trre6g04512 846 Gene3D - 475 765 - -
Trre6g04512 846 Pfam Sodium/hydrogen exchanger family 45 426 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g04512 Trre-Chr6 48328484 48331210 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g04512 7 810 Antiporter Super Family AT2G13620 68.408 0.0 1125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g04512 K26731 - gmx:100818927 1295.03