Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g04473 ATGGCTCATAGATCTGCCAATCAATCATTTTTAGAAAATGGTGACATGCAGACTCTTACTAAGGAAGATAGGAAGACCATAGAATGTTGCACAACAATGATTGGACGAGGCCAATTTCCTCCCTTAATGGTCGTCTATGATTCATGCCAAGGCTATACCGTGGAAGCTGATGGCCTAATCAAAGATATGACATTTATTGCTGAATACACTGGCGATGTGGATTATTTAAAGAAAAGAGAATTTGATGACTGCGACAGCATGATGACATTGCTTCTTGCAGAAGATGGTGCGGCTAGTCTTGTTATATGTGCTGATAAACGCGCAAACATTGCTCGGTTTATTAGTGGCATCAACCATCATACACCGGAGGGTAAGAAGAAACAAAACTGCAAATGTGTCAGATATAACGTTGATGGTGAATGTCGGGTTTTTGTGGTTGCTACCCGCAATATTTATGAAGGGGAAAAATTGTATTATGATTACAATGCATATGAGAATCAATACCCAACTCACCATTTTGTTTGA 525 0.3943 MAHRSANQSFLENGDMQTLTKEDRKTIECCTTMIGRGQFPPLMVVYDSCQGYTVEADGLIKDMTFIAEYTGDVDYLKKREFDDCDSMMTLLLAEDGAASLVICADKRANIARFISGINHHTPEGKKKQNCKCVRYNVDGECRVFVVATRNIYEGEKLYYDYNAYENQYPTHHFV 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g04473 174 PANTHER N-LYSINE METHYLTRANSFERASE KMT5A 23 172 - -
Trre6g04473 174 CDD SET_ATXR5_6-like 37 174 - -
Trre6g04473 174 Gene3D SET domain 1 174 IPR046341 -
Trre6g04473 174 ProSiteProfiles SET domain profile. 40 162 IPR001214 GO:0005515
Trre6g04473 174 SUPERFAMILY SET domain 28 163 IPR046341 -
Trre6g04473 174 Pfam SET domain 92 162 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g04473 Trre-Chr6 48048209 48049330 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Trre6g04473 SET 4.1e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g04473 K24406 - mof:131165799 277.715