Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g04457 ATGCATCTATTCAATGTTAAATATAGGTCACATAGAAAACATTTACTAGCACGTGAGGCCGAAGCAGCAAGTTGGAATCAAAGGAGACAAGTGTATGGTGGTGTAGGAGGAAAAAGAGAGGTGATAAGTCCATGGCCAACTGCTGCAGCAGCACCAATCATGGTCTTTTATGCATATGTGACTCCAAACGCAATAATCCCACGAACAAACTGTTTCTCACAACCTCTGACAACAGTGAGATCACTTGGATGTCCAATTCCCGGCGGCATCCCACCCCATGGTATGTACAAAGCAGATTTCGCCACTGCCGCTCCCGGACTCGCTCCCTTCGACTTCCATCCATCAAAGGAGAGCATAGACGCAGCTATTGGAGATGTTTTATCAAAACCATGGTTGCCACTACCACTTGGACTTAAAGCTCCAGCAATTGATAGCGTAATGGGGGAACTACATAAACAAGGAGTTTCAGACATTCCACCCTAG 483 0.4596 MHLFNVKYRSHRKHLLAREAEAASWNQRRQVYGGVGGKREVISPWPTAAAAPIMVFYAYVTPNAIIPRTNCFSQPLTTVRSLGCPIPGGIPPHGMYKADFATAAPGLAPFDFHPSKESIDAAIGDVLSKPWLPLPLGLKAPAIDSVMGELHKQGVSDIPP 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g04457 160 PANTHER TRANSCRIPTION ACTIVATOR GLK1 7 57 IPR044825 GO:0003700|GO:0045893
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g04457 Trre-Chr6 47876100 47878406 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g04457 7 33 G2-like Transcription Factor Family AT2G20570 77.778 3.57e-09 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g04457 - - aprc:113858121 176.792