Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre6g04446 | ATGGCTGCCATGAACTCAAGTGTATTGGCTTGTAGCTATGCCTTATCAGGTTGTTCTGAGCTCAATGCAAAGCTCATTTCTATGCCCTCTATTGCATCACCTGTAGGAGTTTCAGGTTCCAAGTTACCATTGATCAAAGCTCAGCAAGTGAGAGTTCCTGAAGCCAAAGAATCAAGACCAAGTGATGGTAGGAGAAATGCTATTGCTTTATTGGCAGCTACCCTTTTCACCACTGCTGTTTCTGCTTCCAATTCATCTGCTAATGCTAGTGTTTTTGATGAATACCTTGAAAAGAGCAAGGCCAACAAGGAATTGAATGACAAGAAAAGATTAGCTACTAGTGGAGCAAACTTTGCAAGAGCATACACAGTGCAATTTGGTACTTGCAAGTTCCCTGAAAATTTCACTGGTTGTCAAGATCTTGCTAAACAGAAGAAAGTACCATTCATTTCTGAAGATTTGGAACTTGAATGTGAAGGAAAGGACAAATACAAGTGTGGTTCTAATGTTTTCTGGAAATGGTGA | 525 | 0.4019 | MAAMNSSVLACSYALSGCSELNAKLISMPSIASPVGVSGSKLPLIKAQQVRVPEAKESRPSDGRRNAIALLAATLFTTAVSASNSSANASVFDEYLEKSKANKELNDKKRLATSGANFARAYTVQFGTCKFPENFTGCQDLAKQKKVPFISEDLELECEGKDKYKCGSNVFWKW | 174 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre6g04446 | 174 | FunFam | Photosystem I reaction center subunit N | 90 | 174 | - | - | |
Trre6g04446 | 174 | PANTHER | PHOTOSYSTEM I REACTION CENTER SUBUNIT N, CHLOROPLASTIC | 1 | 174 | IPR008796 | GO:0009522|GO:0015979 | |
Trre6g04446 | 174 | Pfam | Photosystem I reaction centre subunit N (PSAN or PSI-N) | 44 | 174 | IPR008796 | GO:0009522|GO:0015979 | |
Trre6g04446 | 174 | Gene3D | - | 90 | 174 | IPR044907 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre6g04446 | Trre-Chr6 | 47749827 | 47750966 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre6g04446 | 1 | 145 | Calmodulin-binding Proteins | AT5G64040 | 64.667 | 5.81e-56 | 172 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre6g04446 | K02701 | - | tcc:18611871 | 271.166 |