Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g04437 ATGGAAGGAAAAAAGCCATATGTGGTTGTGTTTGTGATACAAACTATATATGCAGCTTATTTTCTACTTTCCAAAGCTGCATTTGATCATGGAATGAACAATTTCATCTTTGTTTTCTATAGACAAGCAGTAGCTACCATTTTCCTCATTCCTTTTGCTTTCATCTTCGAATGGAAATTTGCACCCCCTTTGTCTTTCAGGATCTTCTGCAAGTTTTTCCTTCTTTCTTTTTGCGGGATTACTTTGAGCTTGAATATATATGGTGTTGGTTTGATTTACACCTCTCCAACTTTGGCTGCAGCTACCGCAAATTGTCTTCCGGTTATCACCTTCTTTTTAGCACTCATACTTGGGGTTGAAAGTTTGAAAATAAAGACAGGAGCTGGGATTGCTAAGTTGCTTCCTCATGTTGCTCTCCACCACATATTATGGGGTCTATGGATGGTGTTACAGGCTTTTGTACTAAAAGACTACCCGTCAAAGTTGATATTTACGACAATTCAGTGTTTCTTAAGCTCAATTCAGTCTTTAGTTATCGCATTGGCCATAGAAAGGGACATTGAGCAGTGGAAATTGGGTTGGAATATCACTCTCCTTGCCGTAGCTTATTGTGGAATTATTGTGACAGGGGTGTCATATTACTTAATGACATGGGTTATAGAGAAGAAAGGGCCAGTGTTTCTTGCCATGTCAACACCACTAGCTCTCATTATTACAATATTTTCCTCTATAATTCTTTTAGGAGATATAATAAGTTTGGGAAGCGTATTAGGTGGGTTACTGTTAGTTGTGGGACTATCCAGTGTGCTTTGGGGAAAGAACAGAGAGCAATCACCAAAAGCTTCCCAAGATTTGGAACAACCATCATCGGTCTAG 876 0.3904 MEGKKPYVVVFVIQTIYAAYFLLSKAAFDHGMNNFIFVFYRQAVATIFLIPFAFIFEWKFAPPLSFRIFCKFFLLSFCGITLSLNIYGVGLIYTSPTLAAATANCLPVITFFLALILGVESLKIKTGAGIAKLLPHVALHHILWGLWMVLQAFVLKDYPSKLIFTTIQCFLSSIQSLVIALAIERDIEQWKLGWNITLLAVAYCGIIVTGVSYYLMTWVIEKKGPVFLAMSTPLALIITIFSSIILLGDIISLGSVLGGLLLVVGLSSVLWGKNREQSPKASQDLEQPSSV 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g04437 291 PANTHER WAT1-RELATED PROTEIN 138 280 IPR030184 GO:0016020|GO:0022857
Trre6g04437 291 Pfam EamA-like transporter family 139 270 IPR000620 GO:0016020
Trre6g04437 291 Pfam EamA-like transporter family 6 131 IPR000620 GO:0016020
Trre6g04437 291 SUPERFAMILY Multidrug resistance efflux transporter EmrE 190 275 - -
Trre6g04437 291 SUPERFAMILY Multidrug resistance efflux transporter EmrE 40 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g04437 Trre-Chr6 47654448 47659247 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g04437 1 204 Nodulin-like Gene Family AT5G64700 51.163 8.60e-70 215
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g04437 - - gmx:100804562 390.193