Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g04436 ATGAAAGGGAAAAAGCCATATGTGGTTGTGTTTGTTATACAAACTATATATGCAGCTATGTTTCTACTCTCCAAAGCTGCATTTGATCATGGAATGAACAATTTCATCTTTGTTTTCTATAGACAAGCAGTAGCTACCATTTTCCTCATACCTTTTGCTTTCATCTTTGAATGGAAATTTGCACCCCCTTTGTCTTTCAGGACCTTCTGCAAGATTTTCCTTCTTTCTTTCTGCGGGATTACTTTGAGCTTGGATATATATGGTATTGGTTTGATTTACACCTCTCCAACTTTGGCAGCTGCTACCACAAATTGTCTTCCGGTTATCACCTTCTTTTTAGCACTCATACTTAGGGTTGAAAGTTTGAAAATAAAGACAAGAGCTGGGATTGCTAAGTTGATAGGCATTGTGGCATGTTTGGCTGGTGCATCTACCCTTGCCTTTTATAAAGGTCCTCATTTAAAACTTTTAAGTCATCATCATCACATTCTAGGATACCATAAACAACATGATCAAAGTCATATTCCATCTGGTACATGGATAAAAGGTTGCTTCCTCATGTTGCTCTCCAACACATTTTGGGGTCTATGGTTGGTGTTACAGGCTTTTGTAATAAAAGACTACCCGTCGAAGCTGATATTTACGACTCTTCAGTGTTTCTTAAGCTCAATCCAATCGTTAGTTATCGCCTTAGCCATAGAAAGGGACATTGAGCAGTGGAAATTGGGTTGGAATATCACCCTTCTTGCTGTAGCTTATTGTGGAATTATTGTGACAGGGGTGTCATATTACTTAATGACATGGGTTATAGAGAAGAAAGGACCAGTGTTTCTTGCCATGTCAACACCACTAGCTCTCATTATTACAATATTGTCCTCTATAATTCTCTTAGGTGATATAATAAGTTTGGGAAGCGTGTTAGGTGGATTACTGTTAGTTGTGGGACTATACAGTGTGCTTTGGGGAAAGAACAGAGAGCAAACACCAAAAGCTTCCCAAGATTTGGAACAGCCATAA 1017 0.3864 MKGKKPYVVVFVIQTIYAAMFLLSKAAFDHGMNNFIFVFYRQAVATIFLIPFAFIFEWKFAPPLSFRTFCKIFLLSFCGITLSLDIYGIGLIYTSPTLAAATTNCLPVITFFLALILRVESLKIKTRAGIAKLIGIVACLAGASTLAFYKGPHLKLLSHHHHILGYHKQHDQSHIPSGTWIKGCFLMLLSNTFWGLWLVLQAFVIKDYPSKLIFTTLQCFLSSIQSLVIALAIERDIEQWKLGWNITLLAVAYCGIIVTGVSYYLMTWVIEKKGPVFLAMSTPLALIITILSSIILLGDIISLGSVLGGLLLVVGLYSVLWGKNREQTPKASQDLEQP 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g04436 338 Pfam EamA-like transporter family 6 136 IPR000620 GO:0016020
Trre6g04436 338 Pfam EamA-like transporter family 182 320 IPR000620 GO:0016020
Trre6g04436 338 SUPERFAMILY Multidrug resistance efflux transporter EmrE 240 325 - -
Trre6g04436 338 PANTHER WAT1-RELATED PROTEIN 5 327 IPR030184 GO:0016020|GO:0022857
Trre6g04436 338 SUPERFAMILY Multidrug resistance efflux transporter EmrE 40 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g04436 Trre-Chr6 47643644 47647287 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g04436 1 254 Nodulin-like Gene Family AT5G64700 61.240 2.34e-97 287
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g04436 - - gmx:100804562 493.812