Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g04376 ATGATGAGTTTGGTTTTCTTTGTCCTCCTCATAGTTGGGAGGGCTAATGCACAACTTTCTACAAACTTTTACTCAAGTTCTTGTCCAAAACTCTCTTCTACAGTTCAATCCACGGTGAAATCCGCCATAACAAAAGAGGCCCGAATCGGTGCTTCCATCCTCCGTTTATTCTTCCATGATTGCTTTGTCAATGGATGTGATGGGTCAATTCTATTGGATGACACATCAAACTTTACCGGGGAGAAGAATGCAAATCCAAACAGAAACTCTGCTCGTGGATTCGACGTCATTGACAACATAAAAACAGCCGTAGAGAACGTATGTCCCGGAGTTGTATCATGTGCTGATATACTTGCAATTTCAGCTGCCGACTCTGTTGCGATTCTTGGAGGCCCAACTTGGAATGTAAAACTTGGAAGAAGAGACGCTAAGACGGCTAGTCAATCTGCTGCTAACACCAACATCCCTGCACCAACTTCCGACCTCAGTACACTTACCTCAATGTTTAGTGCCGTTGGTCTTTCCTCCAAGGACTTAGTTGCATTGTCAGGTGCTCACACAATTGGACAAGCAAGATGTACAACCTTTAGGACACGAATCTACAATGAGACCAACATAGATACTTCATTTGCAACCACAAGGCAATCAAACTGCCCTAGCACATCAGGATCAGGGGACAACAATTTGGCACCTCTTGATCTTCAAACTCCAACTTCTTTCGACAATAACTACTTCAAGAACCTTGTTAACAAAAAGGGTCTTCTGCATTCTGATCAACAACTTTTCAATGGTGGTTCCACTAACTCCATAGTGAGTGGCTATAGTACTAATCCAAGCTCTTTTTCCTCTGATTTTGCTGCTGCTATGATCAAAATGGGAGACATTAGTCCTCTCACTGGATCCAATGGAGAGATCAGGAAGAACTGTAGAGCAACCAATTAA 942 0.4289 MMSLVFFVLLIVGRANAQLSTNFYSSSCPKLSSTVQSTVKSAITKEARIGASILRLFFHDCFVNGCDGSILLDDTSNFTGEKNANPNRNSARGFDVIDNIKTAVENVCPGVVSCADILAISAADSVAILGGPTWNVKLGRRDAKTASQSAANTNIPAPTSDLSTLTSMFSAVGLSSKDLVALSGAHTIGQARCTTFRTRIYNETNIDTSFATTRQSNCPSTSGSGDNNLAPLDLQTPTSFDNNYFKNLVNKKGLLHSDQQLFNGGSTNSIVSGYSTNPSSFSSDFAAAMIKMGDISPLTGSNGEIRKNCRATN 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g04376 313 ProSiteProfiles Plant heme peroxidase family profile. 18 313 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre6g04376 313 PRINTS Plant peroxidase signature 52 72 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre6g04376 313 PRINTS Plant peroxidase signature 92 105 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre6g04376 313 PRINTS Plant peroxidase signature 177 189 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre6g04376 313 PRINTS Plant peroxidase signature 287 300 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre6g04376 313 PRINTS Plant peroxidase signature 231 246 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre6g04376 313 PRINTS Plant peroxidase signature 247 264 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre6g04376 313 PRINTS Plant peroxidase signature 28 47 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre6g04376 313 PRINTS Plant peroxidase signature 111 121 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre6g04376 313 PRINTS Plant peroxidase signature 130 145 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre6g04376 313 ProSitePatterns Peroxidases proximal heme-ligand signature. 178 188 IPR019793 -
Trre6g04376 313 Gene3D - 22 310 - -
Trre6g04376 313 SUPERFAMILY Heme-dependent peroxidases 18 313 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trre6g04376 313 Pfam Peroxidase 35 276 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre6g04376 313 CDD secretory_peroxidase 18 312 IPR033905 GO:0004601|GO:0042744
Trre6g04376 313 FunFam Peroxidase 22 167 - -
Trre6g04376 313 PRINTS Haem peroxidase superfamily signature 50 64 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre6g04376 313 PRINTS Haem peroxidase superfamily signature 178 193 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre6g04376 313 PRINTS Haem peroxidase superfamily signature 130 142 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre6g04376 313 PRINTS Haem peroxidase superfamily signature 233 248 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre6g04376 313 PRINTS Haem peroxidase superfamily signature 112 129 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre6g04376 313 Gene3D Peroxidase, domain 2 156 292 - -
Trre6g04376 313 FunFam Peroxidase 156 292 - -
Trre6g04376 313 PANTHER PEROXIDASE 72-RELATED 16 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre6g04376 313 ProSitePatterns Peroxidases active site signature. 50 61 IPR019794 GO:0004601
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g04376 Trre-Chr6 47008443 47010284 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g04376 17 313 Peroxidase AT5G05340 79.125 7.15e-177 490
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g04376 K00430 - gmx:100803637 518.85