Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g04375 ATGGCTCCTTTAAATTGTTCTAGATTGACCATGATGAGTTTGGTTTTCTTTGTCCTCCTCATAGTTGGGAGGGCTAATGCACAACTTTCTACAAACTTTTACTCAAGTTCTTGTCCAAAACTCTCTTCTACAGTTCAATCCACGGTGAAATCCGCCATAACAAAAGAGGCCCGAATCGGTGCTTCCATCCTCCGTTTATTCTTCCATGATTGCTTTGTCAATGGATGTGATGGGTCAATTCTATTGGATGACACATCAAACTTTACCGGGGAGAAGAATGCAAATCCAAACAGAAACTCTGCTCGTGGATTCGACGTCATTGACAACATAAAAACAGCCGTAGAGAACGTATGTCCCGGAGTTGTATCATGTGCTGATATACTTGCAATTTCAGCTGCCGACTCTGTTGCGATTCTTGGAGGCCCAACTTGGAATGTAAAACTTGGAAGAAGAGACGCTAAGACGGCTAGTCAATCTGCTGCTAACACCAACATCCCTGCACCAACTTCCGACCTCAGTACACTTACCTCAATGTTTAGTGCCGTTGGTCTTTCCTCCAAGGACTTAGTTGCATTGTCAGGTGCTCACACAATTGGACAAGCAAGATGTACAACCTTTAGGACACGAATCTACAATGAGACCAACATAGATACTTCATTTGCAACCACAAGGCAATCAAACTGCCCTAGCACATCAGGATCAGGGGACAACAATTTGGCACCTCTTGATCTTCAAACTCCAACTTCTTTCGACAATAACTACTTCAAGAACCTTGTTAACAAAAAGGGTCTTCTGCATTCTGATCAACAACTTTTCAATGGTGGTTCCACTAACTCCATAGTGAGTGGCTATAGTACTAATCCAAGCTCTTTTTCCTCTGATTTTGCTGCTGCTATGATCAAAATGGGAGACATTAGTCCTCTCACTGGATCCAATGGAGAGATCAGGAAGAACTGTAGAGCAACCAATTAA 972 0.427 MAPLNCSRLTMMSLVFFVLLIVGRANAQLSTNFYSSSCPKLSSTVQSTVKSAITKEARIGASILRLFFHDCFVNGCDGSILLDDTSNFTGEKNANPNRNSARGFDVIDNIKTAVENVCPGVVSCADILAISAADSVAILGGPTWNVKLGRRDAKTASQSAANTNIPAPTSDLSTLTSMFSAVGLSSKDLVALSGAHTIGQARCTTFRTRIYNETNIDTSFATTRQSNCPSTSGSGDNNLAPLDLQTPTSFDNNYFKNLVNKKGLLHSDQQLFNGGSTNSIVSGYSTNPSSFSSDFAAAMIKMGDISPLTGSNGEIRKNCRATN 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g04375 323 Pfam Peroxidase 45 286 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre6g04375 323 CDD secretory_peroxidase 28 322 IPR033905 GO:0004601|GO:0042744
Trre6g04375 323 ProSiteProfiles Plant heme peroxidase family profile. 28 323 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre6g04375 323 ProSitePatterns Peroxidases proximal heme-ligand signature. 188 198 IPR019793 -
Trre6g04375 323 PRINTS Haem peroxidase superfamily signature 243 258 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre6g04375 323 PRINTS Haem peroxidase superfamily signature 122 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre6g04375 323 PRINTS Haem peroxidase superfamily signature 60 74 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre6g04375 323 PRINTS Haem peroxidase superfamily signature 188 203 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre6g04375 323 PRINTS Haem peroxidase superfamily signature 140 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre6g04375 323 FunFam Peroxidase 166 302 - -
Trre6g04375 323 SUPERFAMILY Heme-dependent peroxidases 28 323 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trre6g04375 323 Gene3D Peroxidase, domain 2 166 302 - -
Trre6g04375 323 PANTHER PEROXIDASE 72-RELATED 26 321 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre6g04375 323 ProSitePatterns Peroxidases active site signature. 60 71 IPR019794 GO:0004601
Trre6g04375 323 Gene3D - 32 320 - -
Trre6g04375 323 FunFam Peroxidase 32 177 - -
Trre6g04375 323 PRINTS Plant peroxidase signature 102 115 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre6g04375 323 PRINTS Plant peroxidase signature 187 199 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre6g04375 323 PRINTS Plant peroxidase signature 121 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre6g04375 323 PRINTS Plant peroxidase signature 140 155 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre6g04375 323 PRINTS Plant peroxidase signature 62 82 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre6g04375 323 PRINTS Plant peroxidase signature 297 310 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre6g04375 323 PRINTS Plant peroxidase signature 257 274 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre6g04375 323 PRINTS Plant peroxidase signature 241 256 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre6g04375 323 PRINTS Plant peroxidase signature 38 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g04375 Trre-Chr6 47008413 47010284 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g04375 27 323 Peroxidase AT5G05340 79.125 1.54e-176 489
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g04375 K00430 - gmx:100803637 525.398